C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 39B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155158 TTC39B 9606 - 9:15163622-15307360 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297615 TTC39B-201 15170845-15307360 protein_coding
  ENST00000380850 TTC39B-202 15170845-15307360 protein_coding
  ENST00000380853 TTC39B-003 15171564-15188065 retained_intron
  ENST00000505732 TTC39B-006 15186587-15307360 retained_intron
  ENST00000506891 TTC39B-004 15249042-15307209 protein_coding
  ENST00000507285 TTC39B-007 15171929-15232444 protein_coding
  ENST00000507993 TTC39B-005 15171946-15250116 protein_coding
  ENST00000512701 TTC39B-001 15163622-15307360 protein_coding
  ENST00000582994 TTC39B-010 15214138-15232444 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297615ENST00000380850ENST00000380853ENST00000505732ENST00000507993ENST00000512701
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297615 N/A N/A N/A N/A 1.929±0.00 N/A N/A 0.550±0.00 N/A 2.698±0.00 0.438±0.00 N/A 0.369±0.00 N/A
ENST00000380850 N/A N/A N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000380853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.803±0.00 3.602±0.00
ENST00000505732 N/A N/A N/A N/A 2.792±0.00 2.551±0.00 N/A N/A 2.046±0.00 N/A N/A N/A N/A N/A
ENST00000507993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.00 N/A N/A 3.040±1.16
ENST00000512701 0.953±0.00 0.988±0.00 2.494±0.00 0.548±0.00 N/A 1.125±0.00 0.284±0.00 2.592±0.00 0.485±0.00 1.950±0.09 1.324±0.00 1.871±1.09 0.277±0.21 0.822±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014A CIL_00014A_0001 CGP 9:14734666-15307360
CIL_000147 CIL_000147_0001 CGP 9:15163622-15465953

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038172 Ttc39b tetratricopeptide repeat domain 39B protein_coding Mus_musculus

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