C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetratricopeptide repeat domain 39B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505732 TTC39B-006 ENSG00000155158 9606 - 9:15186587-15307360 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverENST00000505732
Transcript ID Breast Colon Liver
ENST00000505732 2.792±0.00 2.551±0.00 2.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014A CIL_00014A_0001 CGP 9:14734666-15307360
CIL_000147 CIL_000147_0001 CGP 9:15163622-15465953

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048274 Ttc39b-002 protein_coding Mus_musculus 0 1367
ENSMUST00000102823 Ttc39b-001 protein_coding Mus_musculus 0 1367
ENSMUST00000146519 Ttc39b-005 processed_transcript Mus_musculus 0 726
ENSMUST00000150522 Ttc39b-007 protein_coding Mus_musculus 0 625
ENSMUST00000030205 Ttc39b-003 protein_coding Mus_musculus 0 508
ENSMUST00000148811 Ttc39b-006 protein_coding Mus_musculus 0 409

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