C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: von Hippel-Lindau binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155959 VBP1 9606 + X:155197007-155239817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000286428 VBP1-001 155216366-155239817 protein_coding
  ENST00000460509 VBP1-003 155227144-155238961 retained_intron
  ENST00000535916 VBP1-002 155197007-155239044 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286428ENST00000460509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286428 6.891±0.00 10.982±0.00 2.099±0.00 21.507±4.22 9.343±2.87 8.832±6.90 12.369±6.09 10.953±5.88 5.283±2.70 9.569±3.95 8.720±3.27 12.607±4.23 9.701±2.85 10.481±2.78
ENST00000460509 2.494±0.00 N/A 3.024±0.00 12.458±0.00 N/A N/A N/A N/A 4.194±0.00 N/A N/A N/A N/A 3.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LJ CIL_0003LJ_0001 CGP X:155071420-155239817
CIL_0003LK CIL_0003LK_0001 CGP X:155197007-155264589

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0006457 TAS:IEA protein folding
GO:0016272 IEA prefoldin complex
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044267 TAS cellular protein metabolic process
GO:0051082 IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030241 vbp1 von Hippel-Lindau binding protein 1 protein_coding Danio_rerio
ENSMUSG00000031197 Vbp1 von Hippel-Lindau binding protein 1 protein_coding Mus_musculus

Loading