C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: von Hippel-Lindau binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460509 VBP1-003 ENSG00000155959 9606 + X:155227144-155238961 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverTestisENST00000460509
Transcript ID Adipose Bladder Brain Liver Testis
ENST00000460509 2.494±0.00 3.024±0.00 12.458±0.00 4.194±0.00 3.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LJ CIL_0003LJ_0001 CGP X:155071420-155239817
CIL_0003LK CIL_0003LK_0001 CGP X:155197007-155264589

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033540 Vbp1-001 protein_coding Mus_musculus 0 610
ENSMUST00000114070 Vbp1-002 protein_coding Mus_musculus 0 243
ENSMUST00000123419 Vbp1-003 retained_intron Mus_musculus 4e-25 119

Loading