C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELM2 and Myb/SANT-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286523 ELMSAN1-201 ENSG00000156030 9606 - 14:73715131-73760298 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000286523
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000286523 1.134±0.00 1.566±0.30 0.916±0.00 2.466±0.00 0.498±0.00 0.784±0.18 1.359±0.00 6.671±0.00 2.088±0.00 1.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0001TU CIL_0001TU_0001 CGP 14:73711783-73790285
CIL_0003PQ CIL_0003PQ_0001 CGP 14:73715122-73886827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110294 Elmsan1-001 protein_coding Mus_musculus 0 3661
ENSMUST00000046266 Elmsan1-201 protein_coding Mus_musculus 0 3175
ENSMUST00000130038 Elmsan1-002 processed_transcript Mus_musculus 0 586
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 64
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.0000009 62
ENSMUST00000137562 Elmsan1-003 processed_transcript Mus_musculus 0 348

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