C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELM2 and Myb/SANT-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462716 ELMSAN1-005 ENSG00000156030 9606 - 14:73723162-73729176 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLiverLungOvaryENST00000462716
Transcript ID Bladder Breast Colon Liver Lung Ovary
ENST00000462716 0.760±0.00 0.747±0.00 0.801±0.00 0.876±0.00 0.815±0.00 0.867±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0001TU CIL_0001TU_0001 CGP 14:73711783-73790285
CIL_0003PQ CIL_0003PQ_0001 CGP 14:73715122-73886827

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130038 Elmsan1-002 processed_transcript Mus_musculus 0 532
ENSMUST00000046266 Elmsan1-201 protein_coding Mus_musculus 0 507
ENSMUST00000110294 Elmsan1-001 protein_coding Mus_musculus 0 507
ENSMUST00000077549 Prss43-201 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000111336 Sdhc-001 protein_coding Mus_musculus 0.00009 55

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