C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane emp24 protein transport domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158604 TMED4 9606 - 7:44577894-44582287 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000289577 TMED4-005 44577894-44582287 protein_coding
  ENST00000444131 TMED4-002 44581093-44582241 processed_transcript
  ENST00000457408 TMED4-001 44577894-44582259 protein_coding
  ENST00000477639 TMED4-004 44579904-44582210 retained_intron
  ENST00000481238 TMED4-003 44579897-44582231 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444131ENST00000457408ENST00000477639ENST00000481238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444131 22.420±0.00 N/A 9.045±0.00 12.236±0.00 12.208±0.00 16.738±0.00 6.753±0.00 7.996±0.00 8.637±0.00 N/A 10.894±0.00 25.003±0.00 N/A 27.718±0.00
ENST00000457408 16.507±0.00 17.637±0.00 9.046±0.00 14.872±5.10 12.621±4.07 10.025±2.46 7.579±2.88 18.167±10.20 5.557±3.35 16.700±7.70 14.774±8.19 21.727±9.35 37.047±5.05 14.257±0.88
ENST00000477639 N/A 5.717±0.00 N/A 4.893±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481238 N/A N/A 4.056±0.00 N/A N/A 4.114±1.86 3.992±2.58 7.761±0.00 3.749±0.00 4.184±1.53 N/A 9.804±0.53 9.315±0.00 7.861±3.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000J4 CIL_0000J4_0001 CGP 7:44565417-44582287
CIL_0000J7 CIL_0000J7_0001 CGP 7:44577894-44709066

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IMP signal transducer activity
GO:0005783 IEA endoplasmic reticulum
GO:0006810 IEA transport
GO:0007165 IMP signal transduction
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024954 tmed4 transmembrane emp24 protein transport domain containing 4 protein_coding Danio_rerio
ENSMUSG00000004394 Tmed4 transmembrane emp24 protein transport domain containing 4 protein_coding Mus_musculus

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