C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000J7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158604-ENSG00000105953 CGP 9606 7:44577894-44709066
GeneTranscriptPositionBiotype
ENSG00000105953 (OGDH)
oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
ENST00000222673 (OGDH-001) 44606639-44709066 protein_coding
ENST00000419661 (OGDH-008) 44606595-44666851 protein_coding
ENST00000439616 (OGDH-005) 44606572-44708230 protein_coding
ENST00000443864 (OGDH-007) 44606588-44676594 protein_coding
ENST00000444676 (OGDH-006) 44606628-44708138 protein_coding
ENST00000447398 (OGDH-003) 44606591-44708278 protein_coding
ENST00000449767 (OGDH-002) 44606591-44708328 protein_coding
ENST00000459672 (OGDH-009) 44666621-44675245 processed_transcript
ENST00000497326 (OGDH-010) 44666795-44674752 retained_intron
CIL_0000J7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004394-ENSMUSG00000020456 CGP 10090 11:6270369-6356642
GeneTranscriptPositionBiotype
ENSMUSG00000004394 (Tmed4)
transmembrane emp24 protein transport domain containing 4
ENSMUST00000004508 (Tmed4-001) 6270369-6274870 protein_coding
ENSMUST00000130621 (Tmed4-003) 6271661-6274870 retained_intron
ENSMUST00000132147 (Tmed4-002) 6273741-6274865 protein_coding
ENSMUSG00000020456 (Ogdh)
oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
ENSMUST00000003461 (Ogdh-001) 6291633-6356642 protein_coding
ENSMUST00000081894 (Ogdh-003) 6292605-6356592 protein_coding
ENSMUST00000093350 (Ogdh-002) 6291668-6356592 protein_coding
ENSMUST00000101554 (Ogdh-004) 6291666-6356578 protein_coding
ENSMUST00000125929 (Ogdh-008) 6291641-6297677 retained_intron
ENSMUST00000135124 (Ogdh-006) 6292172-6313818 protein_coding
ENSMUST00000140765 (Ogdh-005) 6291985-6313934 protein_coding
ENSMUSG00000077524 (n-R5s67)
nuclear encoded rRNA 5S 67
ENSMUST00000104336 (n-R5s67-201) 6273311-6273424 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000J7_0001ENSG00000105953ENST00000222673ENST00000419661ENST00000439616ENST00000443864ENST00000444676ENST00000447398ENST00000449767ENST00000459672ENST00000497326CIL_0000J7_0002ENSMUSG00000004394ENSMUST00000004508ENSMUST00000130621ENSMUST00000132147ENSMUSG00000020456ENSMUST00000003461ENSMUST00000081894ENSMUST00000093350ENSMUST00000101554ENSMUST00000125929ENSMUST00000135124ENSMUST00000140765ENSMUSG00000077524ENSMUST00000104336
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000J7_0001ENSG00000105953ENST00000222673ENST00000419661ENST00000439616ENST00000444676ENST00000447398ENST00000449767CIL_0000J7_0002ENSMUSG00000004394ENSMUST00000004508ENSMUST00000130621ENSMUST00000132147ENSMUSG00000020456ENSMUST00000003461ENSMUST00000081894ENSMUST00000093350ENSMUST00000101554ENSMUSG00000077524ENSMUST00000104336
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105953 ENST00000222673 22.111±0.00 18.721±0.00 7.787±0.00 11.078±5.77 19.809±16.49 12.813±5.98 65.806±51.13 24.602±20.54 8.604±0.50 17.707±14.20 74.368±47.31 23.988±8.41 25.645±6.92 23.858±0.77
ENST00000419661 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.018±0.00 N/A N/A N/A N/A
ENST00000439616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.688±0.00 N/A N/A N/A
ENST00000443864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444676 N/A N/A 3.257±0.00 2.184±0.00 2.859±0.00 N/A 23.173±9.53 3.443±0.00 3.957±0.00 4.506±0.00 13.520±0.00 N/A N/A N/A
ENST00000447398 N/A N/A N/A 1.244±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449767 4.435±0.00 N/A 4.674±0.00 11.546±0.00 8.406±0.00 3.356±0.00 N/A N/A N/A N/A N/A 4.348±0.00 N/A 6.442±0.42
ENST00000459672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004394 ENSMUST00000004508 44.684±3.66 25.955±2.51 13.445±1.54 33.657±18.45 31.758±11.97 35.911±3.67 47.661±6.66 81.157±5.24 27.126±12.85 53.433±2.68 16.065±5.92 43.278±10.88 13.127±6.30 39.552±17.06
ENSMUST00000130621 9.910±0.00 N/A 10.874±0.00 26.394±15.08 9.820±0.97 7.760±0.20 N/A N/A N/A N/A N/A 20.886±0.00 8.948±2.22 N/A
ENSMUST00000132147 N/A N/A N/A N/A N/A N/A N/A N/A 14.961±0.00 N/A N/A N/A N/A 8.086±0.00
ENSMUSG00000020456 ENSMUST00000003461 64.555±24.51 42.547±20.40 51.500±8.83 21.904±10.45 41.067±17.92 37.537±11.77 260.763±10.44 105.476±5.68 26.273±5.81 46.147±4.31 174.393±9.74 43.434±15.75 43.498±11.31 9.532±1.75
ENSMUST00000081894 N/A N/A N/A 3.588±0.00 N/A 29.101±8.92 N/A N/A 9.841±3.13 N/A N/A N/A 10.688±5.99 11.384±1.34
ENSMUST00000093350 N/A N/A N/A 9.372±7.35 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000101554 27.089±11.57 131.242±18.80 N/A N/A 67.230±24.00 27.451±12.05 196.825±42.56 57.972±13.31 16.367±3.34 33.511±5.38 N/A 22.934±10.79 N/A 3.810±0.00
ENSMUST00000125929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077524 ENSMUST00000104336 N/A N/A 46.524±0.00 12.163±0.30 4588.770±0.00 N/A N/A N/A 17.255±0.00 N/A N/A N/A 25.188±0.00 14.916±0.00

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