C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000326735 ATP13A2-001 ENSG00000159363 9606 - 1:16985958-17011772 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyOvaryPlacentaTestisENST00000326735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000326735 7.624±0.00 8.324±0.00 0.258±0.00 8.374±3.95 4.646±0.00 2.515±0.00 3.116±0.00 6.175±3.36 9.086±4.12 4.956±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000235 CIL_000235_0002 CGP 1:16985958-17054170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005764 IDA lysosome
GO:0005765 IDA lysosomal membrane
GO:0006200 IEA ATP catabolic process
GO:0006812 IEA cation transport
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016887 NAS:IEA ATPase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0071287 TAS cellular response to manganese ion
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037055 Atp13a2-001 protein_coding Mus_musculus 0 3640
ENSMUST00000127833 Atp13a2-004 protein_coding Mus_musculus 0 3258
ENSMUST00000168047 Atp13a2-008 protein_coding Mus_musculus 0 2231
ENSMUST00000151517 Atp13a2-002 retained_intron Mus_musculus 0 1943
ENSMUST00000125797 Atp13a2-003 retained_intron Mus_musculus 0 1075
ENSMUST00000135117 Atp13a2-006 processed_transcript Mus_musculus 0 963
ENSMUST00000137630 Atp13a2-007 retained_intron Mus_musculus 0 701
ENSMUST00000156995 Atp13a2-005 processed_transcript Mus_musculus 0 418

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