C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000631_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075624-ENSDARG00000045639 CGP 7955 8:16019736-16632414
GeneTranscriptPositionBiotype
ENSDARG00000045639 (elavl4)
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 		ENSDART00000110171 (elavl4-001) 16544954-16632414 protein_coding
ENSDART00000134787 (elavl4-002) 16523554-16631801 protein_coding
ENSDART00000141173 (elavl4-004) 16523630-16573714 protein_coding
ENSDART00000144139 (elavl4-006) 16542870-16599193 processed_transcript
ENSDARG00000075624 (bend5)
BEN domain containing 5 		ENSDART00000111314 (bend5-201) 16020966-16037550 protein_coding
ENSDART00000133114 (bend5-001) 16019736-16037858 protein_coding
CIL_000631_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162373-ENSG00000162374 CGP 9606 1:48727523-50203786
GeneTranscriptPositionBiotype
ENSG00000162373 (BEND5)
BEN domain containing 5 		ENST00000371833 (BEND5-001) 48727523-48776918 protein_coding
ENST00000463562 (BEND5-002) 48727870-48776932 retained_intron
ENST00000476079 (BEND5-004) 48727867-48758933 processed_transcript
ENST00000476096 (BEND5-005) 48727873-48759255 processed_transcript
ENST00000480399 (BEND5-003) 48759207-48776969 processed_transcript
ENST00000489956 (BEND5-006) 48761048-48776735 retained_intron
ENSG00000162374 (ELAVL4)
ELAV like neuron-specific RNA binding protein 4 		ENST00000357083 (ELAVL4-002) 50106292-50201399 protein_coding
ENST00000371819 (ELAVL4-006) 50109706-50202294 protein_coding
ENST00000371821 (ELAVL4-005) 50109626-50203054 protein_coding
ENST00000371823 (ELAVL4-004) 50108966-50201402 protein_coding
ENST00000371824 (ELAVL4-003) 50108933-50203786 protein_coding
ENST00000371827 (ELAVL4-001) 50103910-50203770 protein_coding
ENST00000448907 (ELAVL4-201) 50048014-50201868 protein_coding
ENST00000463650 (ELAVL4-010) 50105690-50145184 processed_transcript
ENST00000474675 (ELAVL4-009) 50177130-50197585 processed_transcript
ENST00000492299 (ELAVL4-008) 50144953-50181300 processed_transcript
ENST00000494555 (ELAVL4-007) 50109816-50145178 processed_transcript
ENSG00000186094 (AGBL4)
ATP/GTP binding protein-like 4 		ENST00000334103 (AGBL4-201) 48534173-48663244 protein_coding
ENST00000371836 (AGBL4-003) 48817507-50023900 protein_coding
ENST00000371838 (AGBL4-004) 48634208-50023913 protein_coding
ENST00000371839 (AGBL4-001) 48532855-50023913 protein_coding
ENST00000416121 (AGBL4-002) 48583870-49045714 protein_coding
ENST00000497451 (AGBL4-005) 49527228-49851518 processed_transcript
ENSG00000215887 (ZNF859P)
zinc finger protein 859, pseudogene 		ENST00000502859 (ZNF859P-001) 49841821-49846400 unprocessed_pseudogene
ENSG00000225623 (AGBL4-IT1)
AGBL4 intronic transcript 1 (non-protein coding) 		ENST00000457061 (AGBL4-IT1-001) 49374201-49472085 sense_intronic
ENSG00000229846 (RP11-141A19.1)
 ENST00000456002 (RP11-141A19.1-001) 49048316-49187585 antisense
ENSG00000230114 (RP11-141A19.2)
 ENST00000420071 (RP11-141A19.2-001) 49257411-49269285 antisense
ENSG00000230828 (RP11-492I2.1)
 ENST00000456070 (RP11-492I2.1-001) 50114937-50115282 processed_pseudogene
ENSG00000233595 (MTND2P29)
MT-ND2 pseudogene 29 		ENST00000438595 (MTND2P29-001) 50017092-50017503 processed_pseudogene
ENSG00000237337 (RP11-567C20.2)
 ENST00000442477 (RP11-567C20.2-001) 50174306-50175868 antisense
ENSG00000237478 (RP5-926E3.1)
 ENST00000428836 (RP5-926E3.1-001) 49691262-49691523 processed_pseudogene
ENSG00000279324 (RP11-93G23.2)
 ENST00000622945 (RP11-93G23.2-001) 49994318-49996218 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000631_0001ENSDARG00000045639ENSDART00000110171ENSDART00000134787ENSDART00000141173ENSDART00000144139ENSDARG00000075624ENSDART00000111314ENSDART00000133114CIL_000631_0002ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000162374ENST00000357083ENST00000371819ENST00000371821ENST00000371823ENST00000371824ENST00000371827ENST00000448907ENST00000463650ENST00000474675ENST00000492299ENST00000494555ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000215887ENST00000502859ENSG00000225623ENST00000457061ENSG00000229846ENST00000456002ENSG00000230114ENST00000420071ENSG00000230828ENST00000456070ENSG00000233595ENST00000438595ENSG00000237337ENST00000442477ENSG00000237478ENST00000428836ENSG00000279324ENST00000622945
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000631_0001ENSDARG00000045639ENSDART00000110171ENSDART00000134787ENSDART00000144139ENSDARG00000075624ENSDART00000111314ENSDART00000133114CIL_000631_0002ENSG00000162373ENST00000371833ENST00000463562ENST00000476079ENST00000476096ENST00000480399ENST00000489956ENSG00000162374ENST00000357083ENST00000371819ENST00000371821ENST00000371824ENST00000371827ENST00000448907ENST00000474675ENST00000492299ENSG00000186094ENST00000334103ENST00000371836ENST00000371838ENST00000371839ENST00000416121ENST00000497451ENSG00000215887ENST00000502859ENSG00000225623ENST00000457061ENSG00000229846ENST00000456002ENSG00000230114ENST00000420071ENSG00000230828ENST00000456070ENSG00000233595ENST00000438595ENSG00000237337ENST00000442477ENSG00000237478ENST00000428836ENSG00000279324ENST00000622945
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045639 ENSDART00000110171 N/A N/A N/A 46.920±0.00 N/A N/A 0.450±0.22 0.338±0.09 0.055±0.00 N/A N/A N/A N/A N/A
ENSDART00000134787 N/A N/A N/A 49.097±0.00 N/A N/A 0.093±0.00 0.108±0.00 N/A N/A 2.127±0.00 N/A N/A N/A
ENSDART00000141173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144139 N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075624 ENSDART00000111314 N/A N/A N/A N/A N/A N/A 0.271±0.02 N/A N/A N/A 0.095±0.00 N/A N/A N/A
ENSDART00000133114 N/A N/A N/A 2.114±0.20 N/A N/A 0.149±0.03 0.563±0.25 0.154±0.00 N/A 0.185±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162373 ENST00000371833 0.384±0.00 0.983±0.00 0.357±0.00 1.767±0.16 0.169±0.00 1.117±0.00 0.168±0.08 0.723±0.00 0.195±0.00 0.260±0.00 0.175±0.00 1.660±1.07 0.290±0.15 1.389±0.44
ENST00000463562 0.612±0.00 2.399±0.00 N/A 5.301±0.00 0.427±0.36 2.589±0.00 0.250±0.17 3.411±0.00 0.184±0.00 0.434±0.28 N/A 2.682±2.51 0.493±0.36 1.593±0.80
ENST00000476079 N/A 1.757±0.00 1.086±0.00 3.999±0.00 0.639±0.11 N/A N/A N/A 0.421±0.00 1.066±0.10 1.782±1.16 1.961±0.64 N/A 1.614±0.00
ENST00000476096 N/A 2.455±0.00 N/A N/A 0.422±0.00 0.176±0.00 N/A N/A N/A 1.367±0.00 0.650±0.00 N/A N/A N/A
ENST00000480399 0.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489956 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000162374 ENST00000357083 N/A N/A N/A 5.581±0.00 N/A 0.389±0.00 0.029±0.00 0.041±0.00 N/A N/A N/A N/A 0.065±0.00 1.381±0.56
ENST00000371819 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A 0.006±0.00 0.026±0.00 N/A
ENST00000371821 N/A N/A N/A 2.217±0.00 0.186±0.00 0.660±0.00 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A
ENST00000371823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371824 N/A N/A 0.067±0.00 2.906±1.53 N/A 0.393±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371827 N/A 0.012±0.00 N/A 6.678±2.03 0.047±0.00 0.368±0.24 N/A N/A 0.017±0.00 N/A N/A 0.020±0.01 0.042±0.00 0.311±0.04
ENST00000448907 N/A 0.058±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474675 0.058±0.00 N/A N/A N/A 0.215±0.00 N/A N/A 0.502±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492299 0.025±0.00 N/A N/A N/A N/A N/A 0.029±0.02 0.010±0.00 N/A N/A N/A 0.013±0.00 0.029±0.00 1.126±0.06
ENST00000494555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186094 ENST00000334103 N/A N/A N/A N/A N/A N/A N/A 1.012±0.00 N/A N/A N/A 0.031±0.00 0.414±0.00 N/A
ENST00000371836 N/A N/A N/A N/A N/A N/A 0.142±0.00 N/A N/A 0.193±0.01 N/A N/A N/A N/A
ENST00000371838 N/A N/A 0.588±0.00 1.073±0.00 N/A 0.098±0.07 N/A N/A 0.030±0.00 N/A N/A 0.182±0.14 N/A 0.195±0.00
ENST00000371839 0.037±0.00 N/A 0.436±0.00 1.908±0.90 0.195±0.00 N/A 0.046±0.00 0.333±0.00 0.046±0.00 0.216±0.00 N/A 0.059±0.06 0.223±0.06 0.433±0.06
ENST00000416121 0.025±0.00 0.148±0.00 0.117±0.00 N/A 0.058±0.00 N/A N/A 0.097±0.00 0.077±0.05 N/A 0.185±0.18 N/A N/A 0.194±0.00
ENST00000497451 N/A N/A N/A N/A 0.754±0.00 N/A 0.269±0.00 N/A N/A N/A N/A 0.254±0.00 N/A 0.332±0.00
ENSG00000215887 ENST00000502859 N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A 0.041±0.00 N/A 0.022±0.00
ENSG00000225623 ENST00000457061 N/A N/A N/A 0.292±0.20 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A 0.556±0.54
ENSG00000229846 ENST00000456002 N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 0.025±0.00 0.215±0.02
ENSG00000230114 ENST00000420071 N/A N/A N/A 0.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENSG00000230828 ENST00000456070 N/A 0.043±0.00 N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A
ENSG00000233595 ENST00000438595 N/A 0.080±0.00 N/A 0.655±0.46 0.100±0.00 0.518±0.00 0.076±0.00 0.367±0.00 0.043±0.00 1.049±0.00 0.023±0.00 N/A N/A 0.148±0.00
ENSG00000237337 ENST00000442477 0.066±0.00 N/A N/A 0.108±0.00 N/A 0.025±0.00 0.185±0.00 0.152±0.00 0.144±0.00 N/A N/A N/A N/A N/A
ENSG00000237478 ENST00000428836 N/A N/A 3.847±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00
ENSG00000279324 ENST00000622945 0.079±0.00 0.104±0.00 0.169±0.00 0.096±0.02 0.204±0.00 0.091±0.00 0.024±0.00 N/A 0.079±0.04 0.074±0.03 N/A 0.034±0.00 N/A 0.020±0.00

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