C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELAV like neuron-specific RNA binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357083 ELAVL4-002 ENSG00000162374 9606 + 1:50106292-50201399 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyPlacentaTestisENST00000357083
Transcript ID Brain Colon Heart Kidney Placenta Testis
ENST00000357083 5.581±0.00 0.389±0.00 0.029±0.00 0.041±0.00 0.065±0.00 1.381±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000631 CIL_000631_0002 CGP 1:48727523-50203786
CIL_00063G CIL_00063G_0002 CGP 1:50048014-50423500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 TAS:IEA RNA binding
GO:0003729 IEA mRNA binding
GO:0003730 TAS mRNA 3'-UTR binding
GO:0006396 TAS RNA processing
GO:0006397 TAS mRNA processing
GO:0017091 IDA AU-rich element binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106600 Elavl4-006 protein_coding Mus_musculus 0 2132
ENSMUST00000106598 Elavl4-003 protein_coding Mus_musculus 0 1980
ENSMUST00000102722 Elavl4-005 protein_coding Mus_musculus 0 1977
ENSMUST00000106601 Elavl4-007 protein_coding Mus_musculus 0 1973
ENSMUST00000102723 Elavl4-002 protein_coding Mus_musculus 0 1205
ENSMUST00000106597 Elavl4-004 protein_coding Mus_musculus 0 1201
ENSMUST00000106603 Elavl4-001 protein_coding Mus_musculus 0 1127
ENSMUST00000153200 Elavl4-009 processed_transcript Mus_musculus 0 1050
ENSDART00000134787 elavl4-002 protein_coding Danio_rerio 0 961
ENSDART00000110171 elavl4-001 protein_coding Danio_rerio 0 935
ENSMUST00000138972 Elavl4-012 protein_coding Mus_musculus 0 664
ENSMUST00000144554 Elavl4-010 processed_transcript Mus_musculus 0 590
ENSMUST00000153906 Elavl4-011 protein_coding Mus_musculus 0 475
ENSMUST00000142722 Elavl4-008 protein_coding Mus_musculus 0 379

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