C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spermatogenesis associated 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162814 SPATA17 9606 + 1:217631324-217871696 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366933 SPATA17-001 217631324-217871696 protein_coding
  ENST00000470448 SPATA17-002 217631324-217774424 nonsense_mediated_decay
  ENST00000471021 SPATA17-004 217801718-217867588 processed_transcript
  ENST00000491809 SPATA17-005 217862775-217867133 processed_transcript
  ENST00000492747 SPATA17-003 217737844-217801768 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366933ENST00000470448ENST00000471021ENST00000491809ENST00000492747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366933 0.017±0.00 0.031±0.00 0.185±0.00 0.097±0.00 0.113±0.00 0.008±0.00 0.019±0.00 0.165±0.00 0.010±0.00 0.303±0.00 0.020±0.00 0.108±0.07 0.020±0.00 1.184±0.00
ENST00000470448 N/A N/A N/A 0.367±0.00 0.111±0.00 0.066±0.00 0.096±0.03 N/A 0.146±0.12 0.929±0.00 0.119±0.00 0.603±0.00 N/A 18.928±0.00
ENST00000471021 0.064±0.00 N/A N/A N/A 0.207±0.00 N/A 0.204±0.00 0.371±0.00 N/A 1.241±0.00 N/A 0.615±0.37 0.100±0.08 14.921±0.00
ENST00000491809 0.264±0.00 0.781±0.00 N/A N/A N/A N/A 0.371±0.00 N/A N/A N/A 0.157±0.00 N/A N/A N/A
ENST00000492747 0.050±0.00 0.237±0.00 0.449±0.00 N/A 0.111±0.00 0.029±0.00 N/A N/A 0.448±0.00 1.322±0.00 N/A 0.554±0.58 0.191±0.00 28.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JY CIL_0007JY_0001 UCNEbase 1:215651193-218349979
CIL_000994 CIL_000994_0001 VISTA 1:217292780-217894009

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054414 spata17 spermatogenesis associated 17 protein_coding Danio_rerio
ENSMUSG00000026611 Spata17 spermatogenesis associated 17 protein_coding Mus_musculus

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