C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366933 SPATA17-001 ENSG00000162814 9606 + 1:217631324-217871696 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366933
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366933 0.017±0.00 0.031±0.00 0.185±0.00 0.097±0.00 0.113±0.00 0.008±0.00 0.019±0.00 0.165±0.00 0.010±0.00 0.303±0.00 0.020±0.00 0.108±0.07 0.020±0.00 1.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JY CIL_0007JY_0001 UCNEbase 1:215651193-218349979
CIL_000994 CIL_000994_0001 VISTA 1:217292780-217894009

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183819 Spata17-001 protein_coding Mus_musculus 0 708
ENSMUST00000027908 Spata17-201 protein_coding Mus_musculus 0 706
ENSMUST00000110945 Spata17-003 protein_coding Mus_musculus 0 436

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