C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416913 PPP1R21-008 ENSG00000162869 9606 + 2:48440769-48515385 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLungOvaryPlacentaENST00000416913
Transcript ID Breast Heart Kidney Lung Ovary Placenta
ENST00000416913 1.402±0.00 0.415±0.00 3.375±0.00 2.188±0.00 2.014±0.00 1.505±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0001 CGP 2:48314637-48515391
CIL_0007IT CIL_0007IT_0001 CGP 2:48440598-48598513

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038551 Ppp1r21-001 protein_coding Mus_musculus 0 2479
ENSMUST00000185400 Ppp1r21-003 retained_intron Mus_musculus 0 385
ENSMUST00000191340 Ppp1r21-005 retained_intron Mus_musculus 0 261
ENSMUST00000189734 Ppp1r21-004 retained_intron Mus_musculus 0 219

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