C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431614 PPP1R21-007 ENSG00000162869 9606 + 2:48440598-48511468 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000431614
Transcript ID Ovary
ENST00000431614 1.270±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0001 CGP 2:48314637-48515391
CIL_0007IT CIL_0007IT_0001 CGP 2:48440598-48598513

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038551 Ppp1r21-001 protein_coding Mus_musculus 0 2242
ENSMUST00000185400 Ppp1r21-003 retained_intron Mus_musculus 0 359
ENSMUST00000191340 Ppp1r21-005 retained_intron Mus_musculus 0 261

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