C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000294952 PPP1R21-009 ENSG00000162869 9606 + 2:48440797-48515386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294952 4.107±0.00 7.534±0.00 1.691±0.00 6.416±4.06 3.167±1.02 2.913±0.75 1.709±1.43 3.776±2.94 1.444±0.36 1.234±0.02 2.399±0.00 6.013±0.92 5.485±2.69 7.168±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000008 CIL_000008_0001 CGP 2:48314637-48515391
CIL_0007IT CIL_0007IT_0001 CGP 2:48440598-48598513

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0019902 IDA phosphatase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038551 Ppp1r21-001 protein_coding Mus_musculus 0 2713
ENSMUST00000185400 Ppp1r21-003 retained_intron Mus_musculus 0 385
ENSMUST00000191340 Ppp1r21-005 retained_intron Mus_musculus 0 261
ENSMUST00000189734 Ppp1r21-004 retained_intron Mus_musculus 0 220

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