C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004T6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087198-ENSDARG00000089791 CGP 7955 19:13537624-13590112
GeneTranscriptPositionBiotype
ENSDARG00000087198 (cthrc1a)
collagen triple helix repeat containing 1a 		ENSDART00000132892 (cthrc1a-001) 13537624-13549215 protein_coding
ENSDARG00000089791 (slc25a32a)
solute carrier family 25, member 32a 		ENSDART00000128975 (slc25a32a-001) 13559192-13587146 protein_coding
ENSDART00000151064 (slc25a32a-002) 13580026-13590112 protein_coding
ENSDARG00000091466 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000123939 (5S_rRNA.1928-201) 13579181-13579296 rRNA
CIL_0004T6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164932-ENSG00000164933 CGP 9606 8:103371515-103415189
GeneTranscriptPositionBiotype
ENSG00000164932 (CTHRC1)
collagen triple helix repeat containing 1 		ENST00000330295 (CTHRC1-001) 103371515-103382997 protein_coding
ENST00000415886 (CTHRC1-004) 103371550-103376051 protein_coding
ENST00000520337 (CTHRC1-003) 103372433-103382989 protein_coding
ENST00000520880 (CTHRC1-002) 103377138-103382614 protein_coding
ENSG00000164933 (SLC25A32)
solute carrier family 25 (mitochondrial folate carrier), member 32 		ENST00000297578 (SLC25A32-003) 103398635-103415104 protein_coding
ENST00000521645 (SLC25A32-006) 103398635-103415189 nonsense_mediated_decay
ENST00000523256 (SLC25A32-009) 103398635-103415171 nonsense_mediated_decay
ENST00000523701 (SLC25A32-005) 103401487-103402703 processed_transcript
ENST00000523866 (SLC25A32-007) 103400058-103415069 nonsense_mediated_decay
ENSG00000207399 (RNU6-1011P)
RNA, U6 small nuclear 1011, pseudogene 		ENST00000384668 (RNU6-1011P-201) 103384961-103385067 snRNA
ENSG00000266289 (RP11-1C8.6)
 ENST00000577199 (RP11-1C8.6-001) 103383078-103383854 lincRNA
CIL_0004T6_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054196-ENSMUSG00000022299 CGP 10090 15:39076932-39112716
GeneTranscriptPositionBiotype
ENSMUSG00000022299 (Slc25a32)
solute carrier family 25, member 32 		ENSMUST00000022908 (Slc25a32-201) 39094191-39112716 protein_coding
ENSMUSG00000054196 (Cthrc1)
collagen triple helix repeat containing 1 		ENSMUST00000067072 (Cthrc1-001) 39076932-39087119 protein_coding
ENSMUST00000132192 (Cthrc1-003) 39077081-39081619 processed_transcript
ENSMUST00000144800 (Cthrc1-004) 39084070-39087121 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004T6_0001ENSDARG00000087198ENSDART00000132892ENSDARG00000089791ENSDART00000128975ENSDART00000151064ENSDARG00000091466ENSDART00000123939CIL_0004T6_0002ENSG00000164932ENST00000330295ENST00000415886ENST00000520337ENST00000520880ENSG00000164933ENST00000297578ENST00000521645ENST00000523256ENST00000523701ENST00000523866ENSG00000207399ENST00000384668ENSG00000266289ENST00000577199CIL_0004T6_0003ENSMUSG00000022299ENSMUST00000022908ENSMUSG00000054196ENSMUST00000067072ENSMUST00000132192ENSMUST00000144800
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004T6_0001ENSDARG00000087198ENSDART00000132892ENSDARG00000089791ENSDART00000128975ENSDARG00000091466ENSDART00000123939CIL_0004T6_0002ENSG00000164932ENST00000330295ENST00000415886ENST00000520337ENST00000520880ENSG00000164933ENST00000297578ENST00000521645ENST00000523701ENST00000523866ENSG00000207399ENST00000384668ENSG00000266289ENST00000577199CIL_0004T6_0003ENSMUSG00000022299ENSMUST00000022908ENSMUSG00000054196ENSMUST00000067072ENSMUST00000132192ENSMUST00000144800
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000087198 ENSDART00000132892 N/A N/A N/A 0.486±0.07 N/A N/A 0.660±0.71 0.817±0.33 0.038±0.00 N/A 0.112±0.00 N/A N/A N/A
ENSDARG00000089791 ENSDART00000128975 N/A N/A N/A 5.165±2.32 N/A N/A 4.084±2.16 2.487±1.13 2.386±0.00 N/A 1.903±0.00 N/A N/A N/A
ENSDART00000151064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091466 ENSDART00000123939 N/A N/A N/A N/A N/A N/A N/A N/A 0.936±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164932 ENST00000330295 17.021±0.00 5.020±0.00 N/A 0.904±0.00 7.426±1.78 1.119±0.82 0.426±0.35 0.698±0.00 0.722±0.57 1.998±0.00 0.313±0.00 7.574±5.32 29.637±4.60 3.449±2.53
ENST00000415886 N/A N/A N/A 0.121±0.00 N/A N/A N/A 0.566±0.00 2.804±0.00 1.154±0.61 0.257±0.00 3.793±0.94 16.049±0.00 1.446±0.00
ENST00000520337 N/A 0.723±0.00 N/A 0.147±0.00 N/A N/A N/A 0.218±0.00 N/A N/A N/A 0.671±0.00 N/A N/A
ENST00000520880 N/A 1.667±0.00 N/A N/A N/A 1.167±0.00 N/A N/A N/A N/A 0.399±0.00 N/A N/A N/A
ENSG00000164933 ENST00000297578 6.251±0.00 5.693±0.00 N/A 3.675±1.45 5.112±0.00 2.900±0.39 3.540±0.00 5.973±0.00 4.746±0.29 3.823±0.91 2.580±1.02 7.594±0.18 3.321±0.66 7.312±0.31
ENST00000521645 N/A N/A 1.642±0.00 N/A N/A N/A 1.050±0.00 2.595±0.00 N/A N/A N/A N/A N/A N/A
ENST00000523256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523701 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.093±0.00 N/A N/A N/A N/A
ENST00000523866 8.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207399 ENST00000384668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.991±0.00 N/A N/A
ENSG00000266289 ENST00000577199 0.073±0.00 N/A 0.716±0.00 0.091±0.00 0.069±0.05 0.197±0.00 0.021±0.00 0.105±0.00 0.455±0.45 0.875±0.77 N/A 0.094±0.02 0.058±0.01 0.073±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022299 ENSMUST00000022908 3.182±1.22 10.771±6.88 N/A 0.586±0.19 4.358±1.68 6.466±2.39 0.528±0.15 2.309±1.05 2.341±1.21 5.081±2.70 N/A 8.561±5.81 3.132±1.10 0.715±0.17
ENSMUSG00000054196 ENSMUST00000067072 1.055±0.26 3.431±1.05 1.680±0.26 6.264±4.24 2.270±0.28 0.494±0.15 0.241±0.08 0.226±0.09 0.809±0.67 2.403±0.41 0.160±0.09 1.605±0.85 5.165±2.42 0.264±0.14
ENSMUST00000132192 N/A N/A N/A 0.739±0.00 N/A N/A N/A 0.273±0.01 N/A N/A 0.313±0.16 1.339±0.00 3.049±0.91 0.499±0.00
ENSMUST00000144800 N/A N/A N/A N/A N/A 0.291±0.08 N/A 0.236±0.08 0.105±0.00 N/A 0.144±0.06 0.538±0.28 N/A 0.079±0.00

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