C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165383 LRRC18 9606 - 10:48909483-48935190 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298124 LRRC18-201 48909488-48935190 protein_coding
  ENST00000374160 LRRC18-001 48909483-48914232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungOvaryTestisENST00000298124ENST00000374160
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Ovary Testis
ENST00000298124 N/A N/A 0.030±0.00 N/A N/A N/A N/A 1.601±0.00 0.188±0.18 1.057±0.00
ENST00000374160 0.017±0.00 0.043±0.00 0.030±0.00 0.081±0.00 0.017±0.00 0.026±0.00 0.159±0.00 0.922±0.00 0.010±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J0 CIL_0002J0_0002 CGP 10:48684876-48982956
CIL_0007OS CIL_0007OS_0001 UCNEbase 10:48836195-49372114
CIL_0008ZL CIL_0008ZL_0001 VISTA 10:48905403-49506260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076236 lrrc18b leucine rich repeat containing 18b protein_coding Danio_rerio
ENSDARG00000078790 lrrc18a leucine rich repeat containing 18a protein_coding Danio_rerio
ENSMUSG00000041673 Lrrc18 leucine rich repeat containing 18 protein_coding Mus_musculus

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