C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374160 LRRC18-001 ENSG00000165383 9606 - 10:48909483-48914232 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungOvaryENST00000374160
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Ovary
ENST00000374160 0.017±0.00 0.043±0.00 0.030±0.00 0.081±0.00 0.017±0.00 0.026±0.00 0.159±0.00 0.922±0.00 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J0 CIL_0002J0_0002 CGP 10:48684876-48982956
CIL_0007OS CIL_0007OS_0001 UCNEbase 10:48836195-49372114
CIL_0008ZL CIL_0008ZL_0001 VISTA 10:48905403-49506260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038956 Lrrc18-001 protein_coding Mus_musculus 0 880
ENSMUST00000120951 Lrrc18-006 protein_coding Mus_musculus 0 736
ENSMUST00000120866 Lrrc18-002 protein_coding Mus_musculus 0 736

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