C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371717 PMPCA-001 ENSG00000165688 9606 + 9:136410570-136423761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371717 13.790±0.00 20.352±0.00 2.746±0.00 12.324±7.49 8.154±6.14 8.929±3.86 13.160±9.74 14.068±7.53 6.876±4.20 7.404±6.62 10.628±5.35 18.643±9.56 26.699±6.03 31.804±11.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0002 CGP 9:136375577-136410609
CIL_00034J CIL_00034J_0001 CGP 9:136401922-136423761
CIL_00070Y CIL_00070Y_0002 CGP 9:136410570-136439822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004222 TAS metalloendopeptidase activity
GO:0005615 IDA extracellular space
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006508 TAS proteolysis
GO:0006626 TAS protein targeting to mitochondrion
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076431 Pmpca-001 protein_coding Mus_musculus 0 1670
ENSMUST00000114093 Pmpca-002 protein_coding Mus_musculus 0 1382
ENSMUST00000134871 Pmpca-006 processed_transcript Mus_musculus 0 497
ENSMUST00000135155 Pmpca-003 processed_transcript Mus_musculus 0 267
ENSMUST00000137686 Pmpca-004 processed_transcript Mus_musculus 0 265
ENSMUST00000139535 Pmpca-005 processed_transcript Mus_musculus 0 246

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