C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399219 PMPCA-007 ENSG00000165688 9606 + 9:136410661-136423760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENST00000399219
Transcript ID Liver Testis
ENST00000399219 12.888±0.00 7.623±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E3 CIL_0002E3_0002 CGP 9:136375577-136410609
CIL_00034J CIL_00034J_0001 CGP 9:136401922-136423761
CIL_00070Y CIL_00070Y_0002 CGP 9:136410570-136439822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004222 TAS metalloendopeptidase activity
GO:0005615 IDA extracellular space
GO:0005739 IDA mitochondrion
GO:0005743 TAS mitochondrial inner membrane
GO:0006508 TAS proteolysis
GO:0006626 TAS protein targeting to mitochondrion
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076431 Pmpca-001 protein_coding Mus_musculus 0 1062
ENSMUST00000114093 Pmpca-002 protein_coding Mus_musculus 0 776
ENSMUST00000134871 Pmpca-006 processed_transcript Mus_musculus 0 621
ENSMUST00000135155 Pmpca-003 processed_transcript Mus_musculus 0 267
ENSMUST00000137686 Pmpca-004 processed_transcript Mus_musculus 0 265

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