C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY (sex determining region Y)-box 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168875 SOX14 9606 + 3:137764284-137766338 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306087 SOX14-001 137764284-137766338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyPlacentaTestisENST00000306087
Transcript ID Brain Kidney Placenta Testis
ENST00000306087 0.067±0.00 0.033±0.00 2.787±0.74 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081U CIL_00081U_0001 VISTA 3:137167122-137768024
CIL_0007PD CIL_0007PD_0001 UCNEbase 3:137186405-137773237
CIL_0008R7 CIL_0008R7_0001 VISTA 3:137341981-137943122
CIL_0007YL CIL_0007YL_0001 VISTA 3:137620069-138221266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IEA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003682 IEA chromatin binding
GO:0005575 ND cellular_component
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007399 TAS nervous system development
GO:0007601 IEA visual perception
GO:0009649 IEA entrainment of circadian clock
GO:0043565 ISS sequence-specific DNA binding
GO:0044798 IEA nuclear transcription factor complex
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity
GO:2001222 IEA regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070929 sox14 SRY-box containing gene 14 protein_coding Danio_rerio
ENSMUSG00000053747 Sox14 SRY (sex determining region Y)-box 14 protein_coding Mus_musculus

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