C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY (sex determining region Y)-box 14
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000053747 Sox14 10090 - 9:99874106-99876170 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000054819 Sox14-001 99874106-99876170 protein_coding
  ENSMUST00000183065 Sox14-002 99874220-99875655 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverPlacentaTestisENSMUST00000054819ENSMUST00000183065
Transcript ID Brain Breast Liver Placenta Testis
ENSMUST00000054819 7.147±4.97 0.092±0.03 N/A 0.003±0.00 0.160±0.04
ENSMUST00000183065 0.039±0.00 0.194±0.14 0.021±0.00 0.009±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YL CIL_0007YL_0002 VISTA 9:99473254-100074438
CIL_0008R7 CIL_0008R7_0002 VISTA 9:99694345-100295440
CIL_00081U CIL_00081U_0002 VISTA 9:99830871-100431770
CIL_00092H CIL_00092H_0002 VISTA 9:99866422-100468225
CIL_0007PD CIL_0007PD_0002 UCNEbase 9:99867520-100325644

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 ISS negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003682 IDA chromatin binding
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0007601 IMP visual perception
GO:0009649 IMP entrainment of circadian clock
GO:0043565 ISS sequence-specific DNA binding
GO:0044798 IDA nuclear transcription factor complex
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0046982 IDA protein heterodimerization activity
GO:2001222 IMP regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070929 sox14 SRY-box containing gene 14 protein_coding Danio_rerio
ENSG00000168875 SOX14 SRY (sex determining region Y)-box 14 protein_coding Homo_sapiens

Loading