C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306688 LRRC45-001 ENSG00000169683 9606 + 17:82023302-82031151 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306688 2.121±0.00 3.868±0.00 0.106±0.00 1.475±0.58 4.458±0.00 2.270±1.52 0.968±0.82 2.955±2.08 2.352±2.01 4.259±0.00 1.276±0.00 4.674±2.71 6.377±1.14 3.389±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VS CIL_0004VS_0001 CGP 17:81976807-82024107
CIL_0004VR CIL_0004VR_0001 CGP 17:82018702-82031151
CIL_0004VQ CIL_0004VQ_0001 CGP 17:82023302-82034204

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005813 IDA centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026139 Lrrc45-001 protein_coding Mus_musculus 0 2004
ENSMUST00000145781 Lrrc45-002 nonsense_mediated_decay Mus_musculus 0 1314
ENSMUST00000151852 Lrrc45-003 protein_coding Mus_musculus 0 555

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