C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TraB domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170638 TRABD 9606 + 22:50185915-50199598 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303434 TRABD-001 50185917-50199598 protein_coding
  ENST00000380909 TRABD-003 50185915-50199564 protein_coding
  ENST00000395827 TRABD-004 50190598-50199475 protein_coding
  ENST00000395829 TRABD-005 50193014-50199569 protein_coding
  ENST00000463233 TRABD-002 50185918-50199595 retained_intron
  ENST00000472677 TRABD-006 50196893-50198711 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303434ENST00000380909ENST00000395827ENST00000395829ENST00000463233ENST00000472677
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303434 2.088±0.00 N/A N/A N/A N/A 1.557±0.00 0.076±0.00 N/A N/A N/A 2.132±0.00 N/A 3.268±0.00 4.878±0.00
ENST00000380909 2.680±0.00 5.636±0.00 N/A N/A N/A N/A 1.859±0.00 N/A 1.282±0.00 3.267±0.00 N/A 15.655±11.89 5.639±2.42 2.516±0.00
ENST00000395827 N/A N/A 0.632±0.00 N/A 1.508±0.33 2.375±0.00 N/A 3.197±0.00 1.558±0.00 4.066±0.00 1.609±0.00 3.536±0.00 4.193±2.84 N/A
ENST00000395829 N/A 8.558±0.00 0.132±0.00 2.007±0.00 4.640±0.00 2.564±2.12 1.330±0.00 8.503±0.00 0.902±0.39 7.964±0.00 1.242±0.00 25.448±26.09 5.788±2.78 10.248±5.25
ENST00000463233 N/A 6.391±0.00 N/A N/A 2.651±0.00 N/A N/A 4.730±0.00 2.490±0.00 4.174±0.00 0.200±0.00 1.944±0.00 N/A 3.433±1.61
ENST00000472677 N/A N/A N/A 1.222±0.00 N/A N/A N/A N/A 0.234±0.00 N/A N/A 5.556±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GZ CIL_0000GZ_0001 CGP 22:50170731-50199598
CIL_000098 CIL_000098_0001 CGP 22:50185915-50217616

Gene Ontology

No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010445 trabd TraB domain containing protein_coding Danio_rerio
ENSMUSG00000015363 Trabd TraB domain containing protein_coding Mus_musculus

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