C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TraB domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463233 TRABD-002 ENSG00000170638 9606 + 22:50185918-50199595 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungMuscleOvaryTestisENST00000463233
Transcript ID Adrenal Breast Kidney Liver Lung Muscle Ovary Testis
ENST00000463233 6.391±0.00 2.651±0.00 4.730±0.00 2.490±0.00 4.174±0.00 0.200±0.00 1.944±0.00 3.433±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GZ CIL_0000GZ_0001 CGP 22:50170731-50199598
CIL_000098 CIL_000098_0001 CGP 22:50185915-50217616

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169891 Trabd-003 protein_coding Mus_musculus 0 924
ENSMUST00000165690 Trabd-004 protein_coding Mus_musculus 0 918
ENSMUST00000081702 Trabd-001 protein_coding Mus_musculus 0 918
ENSMUST00000169870 Trabd-002 nonsense_mediated_decay Mus_musculus 0 846
ENSMUST00000163696 Trabd-007 retained_intron Mus_musculus 0 202
ENSMUST00000170754 Trabd-005 retained_intron Mus_musculus 0 202

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