C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: TraB domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472677 TRABD-006 ENSG00000170638 9606 + 22:50196893-50198711 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryENST00000472677
Transcript ID Brain Liver Ovary
ENST00000472677 1.222±0.00 0.234±0.00 5.556±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GZ CIL_0000GZ_0001 CGP 22:50170731-50199598
CIL_000098 CIL_000098_0001 CGP 22:50185915-50217616

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169891 Trabd-003 protein_coding Mus_musculus 0 320
ENSMUST00000165690 Trabd-004 protein_coding Mus_musculus 0 318
ENSMUST00000169870 Trabd-002 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000081702 Trabd-001 protein_coding Mus_musculus 0 318
ENSMUST00000163696 Trabd-007 retained_intron Mus_musculus 0 204
ENSMUST00000170754 Trabd-005 retained_intron Mus_musculus 0 204

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