C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000170653 ATF7 9606 - 12:53507856-53626410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000420353 ATF7-001 53512059-53626407 protein_coding
  ENST00000456903 ATF7-006 53513442-53626000 protein_coding
  ENST00000546661 ATF7-003 53516649-53524976 processed_transcript
  ENST00000548118 ATF7-009 53542887-53625996 protein_coding
  ENST00000548446 ATF7-007 53507856-53626370 protein_coding
  ENST00000550373 ATF7-008 53543091-53543951 processed_transcript
  ENST00000551087 ATF7-004 53515781-53523269 processed_transcript
  ENST00000551480 ATF7-005 53534542-53625979 protein_coding
  ENST00000588078 ATF7-011 53534606-53625971 protein_coding
  ENST00000588232 ATF7-010 53534540-53626363 protein_coding
  ENST00000589726 ATF7-013 53600752-53626387 retained_intron
  ENST00000591397 ATF7-002 53542887-53626410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungMuscleOvaryPlacentaTestisENST00000420353ENST00000548118ENST00000550373ENST00000588078ENST00000591397
Transcript ID Brain Liver Lung Muscle Ovary Placenta Testis
ENST00000420353 N/A N/A 0.614±0.00 N/A 3.505±2.34 N/A N/A
ENST00000548118 1.111±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550373 N/A N/A N/A 2.606±0.00 N/A N/A N/A
ENST00000588078 N/A N/A N/A N/A 5.096±0.00 5.751±0.00 6.443±0.00
ENST00000591397 N/A 1.826±0.00 N/A N/A 3.111±0.00 4.089±0.00 3.816±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_00061S CIL_00061S_0001 CGP 12:53507856-53677408

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 NAS nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA:IEA regulation of transcription, DNA-templated
GO:0008134 IDA transcription factor binding
GO:0016032 IEA viral process
GO:0019899 IPI enzyme binding
GO:0034399 IDA nuclear periphery
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0051019 IDA mitogen-activated protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011298 atf7a activating transcription factor 7a protein_coding Danio_rerio
ENSDARG00000055481 atf7b activating transcription factor 7b protein_coding Danio_rerio
ENSMUSG00000099083 Atf7 activating transcription factor 7 protein_coding Mus_musculus

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