C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: activating transcription factor 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000099083 Atf7 10090 - 15:102525946-102625464 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000096143 Atf7-201 102528636-102529025 protein_coding
  ENSMUST00000108828 Atf7-001 102536643-102625453 protein_coding
  ENSMUST00000169033 Atf7-007 102537323-102625088 protein_coding
  ENSMUST00000183452 Atf7-012 102547775-102625464 nonsense_mediated_decay
  ENSMUST00000183727 Atf7-004 102545711-102625438 retained_intron
  ENSMUST00000183765 Atf7-013 102547827-102624922 protein_coding
  ENSMUST00000183786 Atf7-009 102593547-102625464 retained_intron
  ENSMUST00000184077 Atf7-011 102551442-102625067 protein_coding
  ENSMUST00000184485 Atf7-006 102533572-102625439 protein_coding
  ENSMUST00000184616 Atf7-002 102528636-102625450 protein_coding
  ENSMUST00000184906 Atf7-008 102525946-102625073 protein_coding
  ENSMUST00000184918 Atf7-014 102562929-102625070 retained_intron
  ENSMUST00000185070 Atf7-010 102551442-102625446 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000184485ENSMUST00000184616ENSMUST00000184906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000184485 N/A 4.369±0.56 N/A N/A N/A 4.596±0.57 N/A 4.175±0.41 1.945±0.00 7.372±0.13 N/A 7.639±0.00 N/A 2.515±0.17
ENSMUST00000184616 22.102±7.13 8.551±3.09 15.548±1.49 7.200±4.82 18.032±4.58 6.893±2.54 9.066±1.82 6.063±1.80 4.601±1.42 18.470±3.46 7.429±0.45 20.036±7.35 6.183±3.40 4.125±2.67
ENSMUST00000184906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.860±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0002 VISTA 15:102394217-102994945
CIL_00061S CIL_00061S_0002 CGP 15:102525946-102672352

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0019899 IEA enzyme binding
GO:0034399 ISS nuclear periphery
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0051019 IEA mitogen-activated protein kinase binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011298 atf7a activating transcription factor 7a protein_coding Danio_rerio
ENSDARG00000055481 atf7b activating transcription factor 7b protein_coding Danio_rerio
ENSG00000170653 ATF7 activating transcription factor 7 protein_coding Homo_sapiens

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