C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: activating transcription factor 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588078 ATF7-011 ENSG00000170653 9606 - 12:53534606-53625971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000588078
Transcript ID Ovary Placenta Testis
ENST00000588078 5.096±0.00 5.751±0.00 6.443±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B4 CIL_0009B4_0001 VISTA 12:53396852-53997557
CIL_00061S CIL_00061S_0001 CGP 12:53507856-53677408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169033 Atf7-007 protein_coding Mus_musculus 0 484
ENSMUST00000184485 Atf7-006 protein_coding Mus_musculus 0 484
ENSMUST00000184906 Atf7-008 protein_coding Mus_musculus 0 484
ENSMUST00000184772 Gm28047-001 nonsense_mediated_decay Mus_musculus 0 484
ENSMUST00000183765 Atf7-013 protein_coding Mus_musculus 0 453
ENSMUST00000183727 Atf7-004 retained_intron Mus_musculus 0 453
ENSMUST00000108828 Atf7-001 protein_coding Mus_musculus 0 453
ENSMUST00000184616 Atf7-002 protein_coding Mus_musculus 0 453
ENSMUST00000184918 Atf7-014 retained_intron Mus_musculus 0 296
ENSMUST00000183452 Atf7-012 nonsense_mediated_decay Mus_musculus 0 265
ENSMUST00000185070 Atf7-010 protein_coding Mus_musculus 0 257
ENSMUST00000184077 Atf7-011 protein_coding Mus_musculus 0 257
ENSMUST00000183786 Atf7-009 retained_intron Mus_musculus 2e-31 139

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