C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, kainate 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399907 GRIK1-002 ENSG00000171189 9606 - 21:29553252-29939912 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DA CIL_0003DA_0001 CGP 21:29077471-29630751
CIL_000317 CIL_000317_0001 CGP 21:29194071-29940033
CIL_00031A CIL_00031A_0001 CGP 21:29536933-30166756

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005234 IEA:IBA extracellular-glutamate-gated ion channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007215 TAS glutamate receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0007417 TAS central nervous system development
GO:0014054 IEA positive regulation of gamma-aminobutyric acid secretion
GO:0014069 IEA postsynaptic density
GO:0015277 IDA kainate selective glutamate receptor activity
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0030534 IEA adult behavior
GO:0032230 IEA positive regulation of synaptic transmission, GABAergic
GO:0032983 IBA kainate selective glutamate receptor complex
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0042391 IEA regulation of membrane potential
GO:0042734 IBA presynaptic membrane
GO:0045202 IEA synapse
GO:0045211 IEA:IBA postsynaptic membrane
GO:0048266 IEA behavioral response to pain
GO:0051899 IEA membrane depolarization
GO:0051966 TAS regulation of synaptic transmission, glutamatergic
GO:0051967 IEA negative regulation of synaptic transmission, glutamatergic
GO:0060079 IEA regulation of excitatory postsynaptic membrane potential
GO:0060080 IEA regulation of inhibitory postsynaptic membrane potential
GO:0097481 IEA neuronal postsynaptic density

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114137 Grik1-203 protein_coding Mus_musculus 0 1947
ENSMUST00000023652 Grik1-201 protein_coding Mus_musculus 0 1779
ENSMUST00000072256 Grik1-202 protein_coding Mus_musculus 0 1779
ENSDART00000007778 grik1a-201 protein_coding Danio_rerio 0 987
ENSDART00000147089 grik1a-001 protein_coding Danio_rerio 0 987
ENSMUST00000105484 Grik2-202 protein_coding Mus_musculus 0 815
ENSMUST00000079751 Grik2-201 protein_coding Mus_musculus 0 815
ENSMUST00000105486 Grik2-005 protein_coding Mus_musculus 0 815
ENSMUST00000105485 Grik2-004 protein_coding Mus_musculus 0 815
ENSMUST00000105487 Grik2-001 protein_coding Mus_musculus 0 815
ENSDART00000109264 GRIK2 (1 of 2)-201 protein_coding Danio_rerio 0 778

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