C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: doublesex and mab-3 related transcription factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173253 DMRT2 9606 + 9:1050354-1057552 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000259622 DMRT2-003 1051614-1057552 protein_coding
  ENST00000302441 DMRT2-201 1051614-1057550 protein_coding
  ENST00000358146 DMRT2-001 1051614-1057552 protein_coding
  ENST00000382251 DMRT2-202 1050354-1057550 protein_coding
  ENST00000382255 DMRT2-004 1050354-1057547 protein_coding
  ENST00000412350 DMRT2-002 1050355-1055872 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000259622 0.196±0.00 N/A N/A 0.147±0.07 0.145±0.01 0.239±0.00 N/A N/A N/A N/A N/A N/A 0.073±0.00
ENST00000302441 N/A 0.086±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.096±0.00 0.055±0.00 0.084±0.00 0.338±0.00
ENST00000358146 0.841±0.00 N/A N/A 0.129±0.00 0.311±0.00 N/A N/A 6.442±0.00 N/A N/A N/A N/A N/A
ENST00000382251 0.543±0.00 N/A N/A 0.424±0.00 0.699±0.00 0.239±0.00 N/A 3.214±0.00 0.156±0.00 0.729±0.00 0.266±0.00 0.028±0.00 0.084±0.00
ENST00000382255 N/A N/A N/A 0.056±0.00 N/A 0.098±0.00 N/A N/A N/A N/A 0.184±0.00 N/A 0.330±0.00
ENST00000412350 0.869±0.00 N/A 3.510±0.00 0.553±0.33 N/A N/A 0.077±0.00 N/A N/A N/A 0.925±0.00 0.062±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UR CIL_0008UR_0001 VISTA 9:668797-1270093
CIL_0008NH CIL_0008NH_0001 VISTA 9:673435-1275288
CIL_0007KZ CIL_0007KZ_0001 UCNEbase 9:927217-1320417
CIL_000644 CIL_000644_0002 CGP 9:976964-1057552
CIL_000643 CIL_000643_0002 CGP 9:1050354-2193624

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0014807 IEA regulation of somitogenesis
GO:0042803 IEA protein homodimerization activity
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0048706 IEA embryonic skeletal system development
GO:2000287 IEA positive regulation of myotome development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000015072 dmrt2a doublesex and mab-3 related transcription factor 2a protein_coding Danio_rerio
ENSMUSG00000048138 Dmrt2 doublesex and mab-3 related transcription factor 2 protein_coding Mus_musculus

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