C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008UR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs196 VISTA 9606 9:668797-1270093
GeneTranscriptPositionBiotype
ENSG00000064218 (DMRT3)
doublesex and mab-3 related transcription factor 3 		ENST00000190165 (DMRT3-001) 976964-991731 protein_coding
ENST00000417254 (DMRT3-002) 989837-990333 protein_coding
ENSG00000107104 (KANK1)
KN motif and ankyrin repeat domains 1 		ENST00000354485 (KANK1-002) 504703-734129 retained_intron
ENST00000382286 (KANK1-004) 734748-746104 protein_coding
ENST00000382289 (KANK1-003) 732442-746102 protein_coding
ENST00000382293 (KANK1-005) 706889-746103 protein_coding
ENST00000382297 (KANK1-007) 504716-746105 protein_coding
ENST00000382303 (KANK1-001) 470291-746105 protein_coding
ENST00000467541 (KANK1-008) 470592-484491 processed_transcript
ENST00000475690 (KANK1-000) 471467-476769 processed_transcript
ENST00000489369 (KANK1-006) 504702-746103 processed_transcript
ENST00000619269 (KANK1-201) 504695-746106 protein_coding
ENSG00000137090 (DMRT1)
doublesex and mab-3 related transcription factor 1 		ENST00000382276 (DMRT1-001) 841690-969090 protein_coding
ENST00000564322 (DMRT1-003) 841690-894985 retained_intron
ENST00000569227 (DMRT1-002) 842714-968515 protein_coding
ENSG00000173253 (DMRT2)
doublesex and mab-3 related transcription factor 2 		ENST00000259622 (DMRT2-003) 1051614-1057552 protein_coding
ENST00000302441 (DMRT2-201) 1051614-1057550 protein_coding
ENST00000358146 (DMRT2-001) 1051614-1057552 protein_coding
ENST00000382251 (DMRT2-202) 1050354-1057550 protein_coding
ENST00000382255 (DMRT2-004) 1050354-1057547 protein_coding
ENST00000412350 (DMRT2-002) 1050355-1055872 protein_coding
ENSG00000224836 (RP11-341G2.3)
 ENST00000443334 (RP11-341G2.3-001) 1151807-1152140 processed_pseudogene
ENSG00000227914 (RP11-130C19.3)
 ENST00000421645 (RP11-130C19.3-001) 673478-685555 antisense
ENST00000608097 (RP11-130C19.3-002) 674124-677628 antisense
CIL_0008UR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs196 VISTA 10090 19:25304027-25904976
GeneTranscriptPositionBiotype
ENSMUSG00000024837 (Dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSMUST00000025755 (Dmrt1-001) 25505618-25604329 protein_coding
ENSMUST00000087525 (Dmrt1-004) 25505706-25603491 protein_coding
ENSMUST00000160814 (Dmrt1-002) 25505707-25560265 processed_transcript
ENSMUSG00000032702 (Kank1)
KN motif and ankyrin repeat domains 1 		ENSMUST00000049400 (Kank1-001) 25236975-25434496 protein_coding
ENSMUST00000137260 (Kank1-003) 25395303-25409772 processed_transcript
ENSMUST00000146647 (Kank1-002) 25406699-25425984 protein_coding
ENSMUST00000155788 (Kank1-004) 25422239-25424508 retained_intron
ENSMUSG00000042372 (Dmrt3)
doublesex and mab-3 related transcription factor 3 		ENSMUST00000048935 (Dmrt3-201) 25610537-25623920 protein_coding
ENSMUSG00000048138 (Dmrt2)
doublesex and mab-3 related transcription factor 2 		ENSMUST00000053068 (Dmrt2-201) 25672420-25679010 protein_coding
ENSMUSG00000098105 (Gm8825)
predicted gene 8825 		ENSMUST00000182565 (Gm8825-001) 25795810-25796807 processed_pseudogene
ENSMUSG00000101089 (RP23-82C19.2)
RIKEN cDNA 2610016A17 gene 		ENSMUST00000185211 (RP23-82C19.2-001) 25671134-25672239 lincRNA
ENSMUST00000186768 (RP23-82C19.2-002) 25671565-25672253 lincRNA
ENSMUST00000188711 (RP23-82C19.2-003) 25671172-25672222 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UR_0001ENSG00000064218ENST00000190165ENST00000417254ENSG00000107104ENST00000354485ENST00000382286ENST00000382289ENST00000382293ENST00000382297ENST00000382303ENST00000467541ENST00000475690ENST00000489369ENST00000619269ENSG00000137090ENST00000382276ENST00000564322ENST00000569227ENSG00000173253ENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350ENSG00000224836ENST00000443334ENSG00000227914ENST00000421645ENST00000608097CIL_0008UR_0002ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000032702ENSMUST00000049400ENSMUST00000137260ENSMUST00000146647ENSMUST00000155788ENSMUSG00000042372ENSMUST00000048935ENSMUSG00000048138ENSMUST00000053068ENSMUSG00000098105ENSMUST00000182565ENSMUSG00000101089ENSMUST00000185211ENSMUST00000186768ENSMUST00000188711
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UR_0001ENSG00000064218ENST00000190165ENST00000417254ENSG00000107104ENST00000354485ENST00000382286ENST00000382289ENST00000382293ENST00000382297ENST00000382303ENST00000489369ENST00000619269ENSG00000137090ENST00000382276ENST00000564322ENST00000569227ENSG00000173253ENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350ENSG00000224836ENST00000443334ENSG00000227914ENST00000421645ENST00000608097CIL_0008UR_0002ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000032702ENSMUST00000049400ENSMUST00000137260ENSMUST00000146647ENSMUSG00000042372ENSMUST00000048935ENSMUSG00000048138ENSMUST00000053068ENSMUSG00000098105ENSMUST00000182565ENSMUSG00000101089ENSMUST00000185211ENSMUST00000186768ENSMUST00000188711
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064218 ENST00000190165 0.775±0.00 0.800±0.00 N/A 0.295±0.20 0.669±0.49 0.117±0.00 0.022±0.00 N/A N/A 0.289±0.00 0.188±0.00 0.044±0.01 N/A 4.728±2.05
ENST00000417254 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107104 ENST00000354485 N/A N/A 1.695±0.00 0.836±0.00 0.758±0.00 N/A 1.252±0.00 1.332±0.00 4.252±0.00 1.679±0.00 0.607±0.00 1.036±0.00 N/A N/A
ENST00000382286 N/A N/A N/A N/A N/A N/A N/A 7.130±0.00 5.439±0.00 N/A N/A 4.733±0.00 5.365±0.00 N/A
ENST00000382289 N/A 3.335±0.00 N/A N/A N/A 6.192±0.00 N/A N/A 8.240±0.00 2.589±0.00 N/A 5.585±0.00 N/A 11.019±0.00
ENST00000382293 3.182±0.00 1.252±0.00 1.478±0.00 1.506±0.00 10.613±0.00 2.934±0.00 N/A 3.338±0.00 N/A N/A N/A 2.127±0.53 2.184±0.36 N/A
ENST00000382297 8.043±0.00 3.205±0.00 3.148±0.00 3.048±1.61 14.595±11.76 5.280±0.00 18.790±12.92 7.022±1.13 5.617±1.74 2.784±1.32 5.028±3.02 4.939±2.91 15.349±12.38 7.124±1.24
ENST00000382303 N/A N/A 1.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A
ENST00000467541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489369 N/A 0.809±0.00 N/A 0.977±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619269 N/A N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A 2.013±0.00 3.518±0.00 N/A N/A
ENSG00000137090 ENST00000382276 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.398±3.12
ENST00000564322 N/A 0.031±0.00 N/A 0.023±0.00 0.011±0.00 N/A 0.059±0.00 N/A N/A 0.009±0.00 0.036±0.00 0.010±0.00 N/A N/A
ENST00000569227 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.032±0.00 N/A N/A
ENSG00000173253 ENST00000259622 0.196±0.00 N/A N/A 0.147±0.07 0.145±0.01 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENST00000302441 N/A 0.086±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.096±0.00 0.055±0.00 0.084±0.00 N/A 0.338±0.00
ENST00000358146 0.841±0.00 N/A N/A 0.129±0.00 0.311±0.00 N/A N/A 6.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000382251 0.543±0.00 N/A N/A 0.424±0.00 0.699±0.00 0.239±0.00 N/A 3.214±0.00 0.156±0.00 0.729±0.00 0.266±0.00 0.028±0.00 N/A 0.084±0.00
ENST00000382255 N/A N/A N/A 0.056±0.00 N/A 0.098±0.00 N/A N/A N/A N/A 0.184±0.00 N/A N/A 0.330±0.00
ENST00000412350 0.869±0.00 N/A 3.510±0.00 0.553±0.33 N/A N/A 0.077±0.00 N/A N/A N/A 0.925±0.00 0.062±0.00 N/A N/A
ENSG00000224836 ENST00000443334 N/A N/A N/A N/A N/A N/A 1.163±0.00 N/A N/A N/A N/A N/A N/A 0.111±0.00
ENSG00000227914 ENST00000421645 0.046±0.00 0.070±0.00 N/A 0.045±0.03 N/A 0.182±0.00 0.065±0.00 N/A 0.109±0.00 0.271±0.00 N/A 0.203±0.18 N/A N/A
ENST00000608097 N/A N/A 1.861±0.00 N/A N/A N/A N/A N/A N/A 1.378±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024837 ENSMUST00000025755 N/A N/A 0.003±0.00 0.055±0.03 N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.017±0.00 0.377±0.20 4.076±1.69
ENSMUST00000087525 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.059±0.00 N/A N/A
ENSMUST00000160814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSMUSG00000032702 ENSMUST00000049400 4.317±2.63 1.964±0.55 31.059±1.32 1.218±0.69 3.186±1.51 8.070±0.79 6.015±2.47 11.967±2.19 4.334±1.94 6.685±2.86 0.471±0.05 8.467±2.69 8.652±2.71 1.751±0.82
ENSMUST00000137260 N/A 5.154±0.00 N/A N/A 7.157±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146647 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.968±0.00 N/A 3.140±0.00 2.471±0.00 N/A
ENSMUST00000155788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042372 ENSMUST00000048935 0.030±0.01 N/A 0.018±0.01 0.722±0.73 0.017±0.01 0.013±0.00 0.164±0.04 0.022±0.00 0.013±0.01 0.280±0.12 N/A 0.024±0.00 0.285±0.19 0.339±0.12
ENSMUSG00000048138 ENSMUST00000053068 20.390±15.75 3.007±0.98 0.320±0.19 0.282±0.15 15.015±7.99 0.054±0.02 0.112±0.08 2.365±0.45 0.309±0.21 0.615±0.18 0.924±0.31 1.987±0.81 0.750±0.27 0.236±0.11
ENSMUSG00000098105 ENSMUST00000182565 0.094±0.08 0.086±0.02 0.114±0.00 0.021±0.01 0.303±0.35 0.077±0.02 0.059±0.02 0.138±0.14 0.055±0.03 0.034±0.00 0.107±0.07 0.134±0.00 0.048±0.01 0.092±0.00
ENSMUSG00000101089 ENSMUST00000185211 22.247±17.12 0.686±0.08 0.197±0.16 N/A 3.353±0.45 N/A 0.108±0.00 0.927±0.37 0.079±0.06 0.139±0.00 0.421±0.10 2.446±1.42 0.222±0.13 0.184±0.06
ENSMUST00000186768 N/A N/A 0.047±0.00 N/A N/A N/A N/A 0.192±0.10 0.051±0.05 N/A 0.118±0.02 0.118±0.00 N/A 0.056±0.00
ENSMUST00000188711 2.447±0.37 0.430±0.00 0.219±0.12 N/A 1.218±0.00 N/A 0.108±0.00 0.521±0.22 0.062±0.04 0.183±0.00 0.413±0.14 1.193±0.63 0.143±0.13 0.122±0.00

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