C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000644_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035290-ENSDARG00000015072 CGP 7955 5:46619179-46629698
GeneTranscriptPositionBiotype
ENSDARG00000015072 (dmrt2a)
doublesex and mab-3 related transcription factor 2a 		ENSDART00000010786 (dmrt2a-001) 46626544-46629698 protein_coding
ENSDARG00000035290 (dmrt3a)
doublesex and mab-3 related transcription factor 3a 		ENSDART00000051146 (dmrt3a-001) 46619179-46622445 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000644_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064218-ENSG00000173253 CGP 9606 9:976964-1057552
GeneTranscriptPositionBiotype
ENSG00000064218 (DMRT3)
doublesex and mab-3 related transcription factor 3 		ENST00000190165 (DMRT3-001) 976964-991731 protein_coding
ENST00000417254 (DMRT3-002) 989837-990333 protein_coding
ENSG00000173253 (DMRT2)
doublesex and mab-3 related transcription factor 2 		ENST00000259622 (DMRT2-003) 1051614-1057552 protein_coding
ENST00000302441 (DMRT2-201) 1051614-1057550 protein_coding
ENST00000358146 (DMRT2-001) 1051614-1057552 protein_coding
ENST00000382251 (DMRT2-202) 1050354-1057550 protein_coding
ENST00000382255 (DMRT2-004) 1050354-1057547 protein_coding
ENST00000412350 (DMRT2-002) 1050355-1055872 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_000644_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042372-ENSMUSG00000048138 CGP 10090 19:25610537-25679010
GeneTranscriptPositionBiotype
ENSMUSG00000042372 (Dmrt3)
doublesex and mab-3 related transcription factor 3 		ENSMUST00000048935 (Dmrt3-201) 25610537-25623920 protein_coding
ENSMUSG00000048138 (Dmrt2)
doublesex and mab-3 related transcription factor 2 		ENSMUST00000053068 (Dmrt2-201) 25672420-25679010 protein_coding
ENSMUSG00000101089 (RP23-82C19.2)
RIKEN cDNA 2610016A17 gene 		ENSMUST00000185211 (RP23-82C19.2-001) 25671134-25672239 lincRNA
ENSMUST00000186768 (RP23-82C19.2-002) 25671565-25672253 lincRNA
ENSMUST00000188711 (RP23-82C19.2-003) 25671172-25672222 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000644_0001ENSDARG00000015072ENSDART00000010786ENSDARG00000035290ENSDART00000051146CIL_000644_0002ENSG00000064218ENST00000190165ENST00000417254ENSG00000173253ENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350CIL_000644_0003ENSMUSG00000042372ENSMUST00000048935ENSMUSG00000048138ENSMUST00000053068ENSMUSG00000101089ENSMUST00000185211ENSMUST00000186768ENSMUST00000188711
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000644_0001ENSDARG00000015072ENSDART00000010786ENSDARG00000035290ENSDART00000051146CIL_000644_0002ENSG00000064218ENST00000190165ENST00000417254ENSG00000173253ENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350CIL_000644_0003ENSMUSG00000042372ENSMUST00000048935ENSMUSG00000048138ENSMUST00000053068ENSMUSG00000101089ENSMUST00000185211ENSMUST00000186768ENSMUST00000188711
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015072 ENSDART00000010786 N/A N/A N/A 0.109±0.05 N/A N/A 0.101±0.04 0.146±0.06 0.018±0.00 N/A 0.899±0.00 N/A N/A N/A
ENSDARG00000035290 ENSDART00000051146 N/A N/A N/A 0.123±0.05 N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064218 ENST00000190165 0.775±0.00 0.800±0.00 N/A 0.295±0.20 0.669±0.49 0.117±0.00 0.022±0.00 N/A N/A 0.289±0.00 0.188±0.00 0.044±0.01 N/A 4.728±2.05
ENST00000417254 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173253 ENST00000259622 0.196±0.00 N/A N/A 0.147±0.07 0.145±0.01 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENST00000302441 N/A 0.086±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.096±0.00 0.055±0.00 0.084±0.00 N/A 0.338±0.00
ENST00000358146 0.841±0.00 N/A N/A 0.129±0.00 0.311±0.00 N/A N/A 6.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000382251 0.543±0.00 N/A N/A 0.424±0.00 0.699±0.00 0.239±0.00 N/A 3.214±0.00 0.156±0.00 0.729±0.00 0.266±0.00 0.028±0.00 N/A 0.084±0.00
ENST00000382255 N/A N/A N/A 0.056±0.00 N/A 0.098±0.00 N/A N/A N/A N/A 0.184±0.00 N/A N/A 0.330±0.00
ENST00000412350 0.869±0.00 N/A 3.510±0.00 0.553±0.33 N/A N/A 0.077±0.00 N/A N/A N/A 0.925±0.00 0.062±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042372 ENSMUST00000048935 0.030±0.01 N/A 0.018±0.01 0.722±0.73 0.017±0.01 0.013±0.00 0.164±0.04 0.022±0.00 0.013±0.01 0.280±0.12 N/A 0.024±0.00 0.285±0.19 0.339±0.12
ENSMUSG00000048138 ENSMUST00000053068 20.390±15.75 3.007±0.98 0.320±0.19 0.282±0.15 15.015±7.99 0.054±0.02 0.112±0.08 2.365±0.45 0.309±0.21 0.615±0.18 0.924±0.31 1.987±0.81 0.750±0.27 0.236±0.11
ENSMUSG00000101089 ENSMUST00000185211 22.247±17.12 0.686±0.08 0.197±0.16 N/A 3.353±0.45 N/A 0.108±0.00 0.927±0.37 0.079±0.06 0.139±0.00 0.421±0.10 2.446±1.42 0.222±0.13 0.184±0.06
ENSMUST00000186768 N/A N/A 0.047±0.00 N/A N/A N/A N/A 0.192±0.10 0.051±0.05 N/A 0.118±0.02 0.118±0.00 N/A 0.056±0.00
ENSMUST00000188711 2.447±0.37 0.430±0.00 0.219±0.12 N/A 1.218±0.00 N/A 0.108±0.00 0.521±0.22 0.062±0.04 0.183±0.00 0.413±0.14 1.193±0.63 0.143±0.13 0.122±0.00

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