C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007KZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
DMRT2 UCNEbase 9606 9:927217-1320417
GeneTranscriptPositionBiotype
ENSG00000064218 (DMRT3)
doublesex and mab-3 related transcription factor 3 		ENST00000190165 (DMRT3-001) 976964-991731 protein_coding
ENST00000417254 (DMRT3-002) 989837-990333 protein_coding
ENSG00000137090 (DMRT1)
doublesex and mab-3 related transcription factor 1 		ENST00000382276 (DMRT1-001) 841690-969090 protein_coding
ENST00000564322 (DMRT1-003) 841690-894985 retained_intron
ENST00000569227 (DMRT1-002) 842714-968515 protein_coding
ENSG00000173253 (DMRT2)
doublesex and mab-3 related transcription factor 2 		ENST00000259622 (DMRT2-003) 1051614-1057552 protein_coding
ENST00000302441 (DMRT2-201) 1051614-1057550 protein_coding
ENST00000358146 (DMRT2-001) 1051614-1057552 protein_coding
ENST00000382251 (DMRT2-202) 1050354-1057550 protein_coding
ENST00000382255 (DMRT2-004) 1050354-1057547 protein_coding
ENST00000412350 (DMRT2-002) 1050355-1055872 protein_coding
ENSG00000224836 (RP11-341G2.3)
 ENST00000443334 (RP11-341G2.3-001) 1151807-1152140 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0007KZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
DMRT2 UCNEbase 10090 19:25568311-25924074
GeneTranscriptPositionBiotype
ENSMUSG00000024837 (Dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSMUST00000025755 (Dmrt1-001) 25505618-25604329 protein_coding
ENSMUST00000087525 (Dmrt1-004) 25505706-25603491 protein_coding
ENSMUST00000160814 (Dmrt1-002) 25505707-25560265 processed_transcript
ENSMUSG00000042372 (Dmrt3)
doublesex and mab-3 related transcription factor 3 		ENSMUST00000048935 (Dmrt3-201) 25610537-25623920 protein_coding
ENSMUSG00000048138 (Dmrt2)
doublesex and mab-3 related transcription factor 2 		ENSMUST00000053068 (Dmrt2-201) 25672420-25679010 protein_coding
ENSMUSG00000098105 (Gm8825)
predicted gene 8825 		ENSMUST00000182565 (Gm8825-001) 25795810-25796807 processed_pseudogene
ENSMUSG00000101089 (RP23-82C19.2)
RIKEN cDNA 2610016A17 gene 		ENSMUST00000185211 (RP23-82C19.2-001) 25671134-25672239 lincRNA
ENSMUST00000186768 (RP23-82C19.2-002) 25671565-25672253 lincRNA
ENSMUST00000188711 (RP23-82C19.2-003) 25671172-25672222 lincRNA

Mus musculus Ensembl (GRCm38)

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CIL_0007KZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
DMRT2 UCNEbase 7955 5:46586222-46690504
GeneTranscriptPositionBiotype
ENSDARG00000007349 (dmrt1)
doublesex and mab-3 related transcription factor 1 		ENSDART00000044361 (dmrt1-201) 46563478-46609926 protein_coding
ENSDART00000124637 (dmrt1-001) 46563399-46609922 protein_coding
ENSDART00000126066 (dmrt1-202) 46563493-46584251 protein_coding
ENSDART00000128373 (dmrt1-003) 46563493-46584257 processed_transcript
ENSDART00000128825 (dmrt1-002) 46563399-46608358 protein_coding
ENSDART00000130428 (dmrt1-203) 46563399-46608357 protein_coding
ENSDART00000130918 (dmrt1-004) 46563493-46564915 retained_intron
ENSDART00000141316 (dmrt1-005) 46603319-46608729 processed_transcript
ENSDARG00000015072 (dmrt2a)
doublesex and mab-3 related transcription factor 2a 		ENSDART00000010786 (dmrt2a-001) 46626544-46629698 protein_coding
ENSDARG00000035290 (dmrt3a)
doublesex and mab-3 related transcription factor 3a 		ENSDART00000051146 (dmrt3a-001) 46619179-46622445 protein_coding

Danio rerio Ensembl (Zv9)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007KZ_0001ENSG00000064218ENST00000190165ENST00000417254ENSG00000137090ENST00000382276ENST00000564322ENST00000569227ENSG00000173253ENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350ENSG00000224836ENST00000443334CIL_0007KZ_0002ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000042372ENSMUST00000048935ENSMUSG00000048138ENSMUST00000053068ENSMUSG00000098105ENSMUST00000182565ENSMUSG00000101089ENSMUST00000185211ENSMUST00000186768ENSMUST00000188711CIL_0007KZ_0003ENSDARG00000007349ENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373ENSDART00000128825ENSDART00000130428ENSDART00000130918ENSDART00000141316ENSDARG00000015072ENSDART00000010786ENSDARG00000035290ENSDART00000051146
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007KZ_0001ENSG00000064218ENST00000190165ENST00000417254ENSG00000137090ENST00000382276ENST00000564322ENST00000569227ENSG00000173253ENST00000259622ENST00000302441ENST00000358146ENST00000382251ENST00000382255ENST00000412350ENSG00000224836ENST00000443334CIL_0007KZ_0002ENSMUSG00000024837ENSMUST00000025755ENSMUST00000087525ENSMUST00000160814ENSMUSG00000042372ENSMUST00000048935ENSMUSG00000048138ENSMUST00000053068ENSMUSG00000098105ENSMUST00000182565ENSMUSG00000101089ENSMUST00000185211ENSMUST00000186768ENSMUST00000188711CIL_0007KZ_0003ENSDARG00000007349ENSDART00000044361ENSDART00000124637ENSDART00000126066ENSDART00000128373ENSDARG00000015072ENSDART00000010786ENSDARG00000035290ENSDART00000051146
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064218 ENST00000190165 0.775±0.00 0.800±0.00 N/A 0.295±0.20 0.669±0.49 0.117±0.00 0.022±0.00 N/A N/A 0.289±0.00 0.188±0.00 0.044±0.01 N/A 4.728±2.05
ENST00000417254 N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137090 ENST00000382276 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.398±3.12
ENST00000564322 N/A 0.031±0.00 N/A 0.023±0.00 0.011±0.00 N/A 0.059±0.00 N/A N/A 0.009±0.00 0.036±0.00 0.010±0.00 N/A N/A
ENST00000569227 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A 0.032±0.00 N/A N/A
ENSG00000173253 ENST00000259622 0.196±0.00 N/A N/A 0.147±0.07 0.145±0.01 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENST00000302441 N/A 0.086±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.096±0.00 0.055±0.00 0.084±0.00 N/A 0.338±0.00
ENST00000358146 0.841±0.00 N/A N/A 0.129±0.00 0.311±0.00 N/A N/A 6.442±0.00 N/A N/A N/A N/A N/A N/A
ENST00000382251 0.543±0.00 N/A N/A 0.424±0.00 0.699±0.00 0.239±0.00 N/A 3.214±0.00 0.156±0.00 0.729±0.00 0.266±0.00 0.028±0.00 N/A 0.084±0.00
ENST00000382255 N/A N/A N/A 0.056±0.00 N/A 0.098±0.00 N/A N/A N/A N/A 0.184±0.00 N/A N/A 0.330±0.00
ENST00000412350 0.869±0.00 N/A 3.510±0.00 0.553±0.33 N/A N/A 0.077±0.00 N/A N/A N/A 0.925±0.00 0.062±0.00 N/A N/A
ENSG00000224836 ENST00000443334 N/A N/A N/A N/A N/A N/A 1.163±0.00 N/A N/A N/A N/A N/A N/A 0.111±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024837 ENSMUST00000025755 N/A N/A 0.003±0.00 0.055±0.03 N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.017±0.00 0.377±0.20 4.076±1.69
ENSMUST00000087525 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.059±0.00 N/A N/A
ENSMUST00000160814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A
ENSMUSG00000042372 ENSMUST00000048935 0.030±0.01 N/A 0.018±0.01 0.722±0.73 0.017±0.01 0.013±0.00 0.164±0.04 0.022±0.00 0.013±0.01 0.280±0.12 N/A 0.024±0.00 0.285±0.19 0.339±0.12
ENSMUSG00000048138 ENSMUST00000053068 20.390±15.75 3.007±0.98 0.320±0.19 0.282±0.15 15.015±7.99 0.054±0.02 0.112±0.08 2.365±0.45 0.309±0.21 0.615±0.18 0.924±0.31 1.987±0.81 0.750±0.27 0.236±0.11
ENSMUSG00000098105 ENSMUST00000182565 0.094±0.08 0.086±0.02 0.114±0.00 0.021±0.01 0.303±0.35 0.077±0.02 0.059±0.02 0.138±0.14 0.055±0.03 0.034±0.00 0.107±0.07 0.134±0.00 0.048±0.01 0.092±0.00
ENSMUSG00000101089 ENSMUST00000185211 22.247±17.12 0.686±0.08 0.197±0.16 N/A 3.353±0.45 N/A 0.108±0.00 0.927±0.37 0.079±0.06 0.139±0.00 0.421±0.10 2.446±1.42 0.222±0.13 0.184±0.06
ENSMUST00000186768 N/A N/A 0.047±0.00 N/A N/A N/A N/A 0.192±0.10 0.051±0.05 N/A 0.118±0.02 0.118±0.00 N/A 0.056±0.00
ENSMUST00000188711 2.447±0.37 0.430±0.00 0.219±0.12 N/A 1.218±0.00 N/A 0.108±0.00 0.521±0.22 0.062±0.04 0.183±0.00 0.413±0.14 1.193±0.63 0.143±0.13 0.122±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007349 ENSDART00000044361 N/A N/A N/A 0.052±0.02 N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000124637 N/A N/A N/A 0.028±0.01 N/A N/A 1.076±0.27 1.348±0.08 N/A N/A N/A N/A N/A N/A
ENSDART00000126066 N/A N/A N/A N/A N/A N/A 1.616±0.00 N/A 0.028±0.00 N/A 0.058±0.00 N/A N/A N/A
ENSDART00000128373 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.009±0.00 N/A 0.009±0.00 N/A N/A N/A
ENSDART00000128825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000130918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000015072 ENSDART00000010786 N/A N/A N/A 0.109±0.05 N/A N/A 0.101±0.04 0.146±0.06 0.018±0.00 N/A 0.899±0.00 N/A N/A N/A
ENSDARG00000035290 ENSDART00000051146 N/A N/A N/A 0.123±0.05 N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A N/A

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