C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000173926 MARCH3 9606 - 5:126867714-127030808 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308660 MARCH3-001 126867714-127030808 protein_coding
  ENST00000502289 MARCH3-003 126914931-127030169 processed_transcript
  ENST00000504239 MARCH3-005 126898873-126914990 processed_transcript
  ENST00000506088 MARCH3-006 126870191-126878397 retained_intron
  ENST00000515241 MARCH3-002 126914661-126918228 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308660ENST00000502289ENST00000504239ENST00000506088ENST00000515241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308660 0.293±0.00 2.507±0.00 0.014±0.00 0.819±0.00 0.317±0.17 1.049±0.89 0.935±0.65 0.361±0.00 0.098±0.05 0.590±0.42 0.209±0.03 0.722±0.14 0.443±0.07 2.041±0.11
ENST00000502289 N/A N/A N/A 2.924±0.00 1.249±0.00 2.711±1.16 N/A N/A N/A 4.881±0.00 0.751±0.33 N/A 1.067±0.00 N/A
ENST00000504239 N/A N/A N/A N/A N/A N/A N/A N/A 1.804±0.00 N/A N/A N/A N/A N/A
ENST00000506088 2.517±0.00 6.333±0.00 N/A 1.011±0.72 1.235±0.00 2.905±1.93 2.663±1.87 0.936±0.00 0.619±0.00 2.624±0.00 N/A 2.118±0.99 2.999±1.36 27.137±19.18
ENST00000515241 N/A N/A 0.407±0.00 0.237±0.00 2.458±0.00 1.774±0.00 N/A N/A 0.745±0.00 0.844±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007S2 CIL_0007S2_0001 VISTA 5:126699007-127301374
CIL_00041J CIL_00041J_0001 CGP 5:126776623-127030808
CIL_00041K CIL_00041K_0001 CGP 5:126867714-127073492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005764 IDA lysosome
GO:0005768 IDA endosome
GO:0006897 IEA endocytosis
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000032656 March3 membrane-associated ring finger (C3HC4) 3 protein_coding Mus_musculus

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