C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308660 MARCH3-001 ENSG00000173926 9606 - 5:126867714-127030808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308660
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308660 0.293±0.00 2.507±0.00 0.014±0.00 0.819±0.00 0.317±0.17 1.049±0.89 0.935±0.65 0.361±0.00 0.098±0.05 0.590±0.42 0.209±0.03 0.722±0.14 0.443±0.07 2.041±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007S2 CIL_0007S2_0001 VISTA 5:126699007-127301374
CIL_00041J CIL_00041J_0001 CGP 5:126776623-127030808
CIL_00041K CIL_00041K_0001 CGP 5:126867714-127073492

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005764 IDA lysosome
GO:0005768 IDA endosome
GO:0006897 IEA endocytosis
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035278 March3-003 protein_coding Mus_musculus 0 1269
ENSMUST00000102912 March3-001 protein_coding Mus_musculus 0 1099
ENSMUST00000153044 March3-002 retained_intron Mus_musculus 0 780

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