C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine/arginine repetitive matrix 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177679 SRRM3 9606 + 7:76201900-76287288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000464752 SRRM3-002 76265407-76269992 protein_coding
  ENST00000479284 SRRM3-006 76273053-76281486 processed_transcript
  ENST00000479294 SRRM3-004 76234982-76260034 retained_intron
  ENST00000611745 SRRM3-001 76201900-76287286 protein_coding
  ENST00000612155 SRRM3-003 76282614-76287288 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000479284ENST00000611745ENST00000612155
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000479284 N/A N/A 1.117±0.00 N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611745 N/A N/A 2.132±1.44 N/A N/A N/A N/A 0.101±0.00 N/A N/A N/A N/A 0.905±0.33
ENST00000612155 4.388±0.00 1.640±0.00 N/A 0.712±0.56 3.065±0.00 2.300±2.14 1.499±0.00 0.093±0.00 0.339±0.00 0.514±0.00 10.653±8.79 0.651±0.00 1.963±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NT CIL_0006NT_0001 CGP 7:76048051-76287288
CIL_0006NG CIL_0006NG_0001 CGP 7:76201900-76304295

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037965 srrm2 serine/arginine repetitive matrix 2 protein_coding Danio_rerio
ENSMUSG00000039860 Srrm3 serine/arginine repetitive matrix 3 protein_coding Mus_musculus

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