C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: serine/arginine repetitive matrix 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611745 SRRM3-001 ENSG00000177679 9606 + 7:76201900-76287286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverTestisENST00000611745
Transcript ID Brain Liver Testis
ENST00000611745 2.132±1.44 0.101±0.00 0.905±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NT CIL_0006NT_0001 CGP 7:76048051-76287288
CIL_0006NG CIL_0006NG_0001 CGP 7:76201900-76304295

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144211 Srrm3-001 protein_coding Mus_musculus 0 2119
ENSMUST00000013615 Srrm3-003 nonsense_mediated_decay Mus_musculus 0 1814
ENSMUST00000135615 Srrm3-006 retained_intron Mus_musculus 0 438
ENSMUST00000126232 Srrm3-005 protein_coding Mus_musculus 0 425
ENSMUST00000146038 Srrm3-004 retained_intron Mus_musculus 0 403

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