C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine repetitive matrix 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612155 SRRM3-003 ENSG00000177679 9606 + 7:76282614-76287288 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000612155
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000612155 4.388±0.00 1.640±0.00 0.712±0.56 3.065±0.00 2.300±2.14 1.499±0.00 0.093±0.00 0.339±0.00 0.514±0.00 10.653±8.79 0.651±0.00 1.963±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NT CIL_0006NT_0001 CGP 7:76048051-76287288
CIL_0006NG CIL_0006NG_0001 CGP 7:76201900-76304295

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144211 Srrm3-001 protein_coding Mus_musculus 0 357
ENSMUST00000013615 Srrm3-003 nonsense_mediated_decay Mus_musculus 0 357

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