C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chitinase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177830 CHID1 9606 - 11:867860-915058 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323578 CHID1-001 868396-911461 protein_coding
  ENST00000429789 CHID1-003 869762-910835 protein_coding
  ENST00000436108 CHID1-004 869767-910831 protein_coding
  ENST00000449825 CHID1-201 867860-915058 protein_coding
  ENST00000454838 CHID1-202 867860-904816 protein_coding
  ENST00000524538 CHID1-014 869780-870751 retained_intron
  ENST00000524832 CHID1-012 882328-902322 processed_transcript
  ENST00000525225 CHID1-011 902971-910816 protein_coding
  ENST00000525840 CHID1-008 904701-914801 protein_coding
  ENST00000526714 CHID1-020 870419-904864 processed_transcript
  ENST00000528154 CHID1-007 904737-914774 protein_coding
  ENST00000528426 CHID1-010 899353-910791 nonsense_mediated_decay
  ENST00000528521 CHID1-017 870122-884163 nonsense_mediated_decay
  ENST00000528534 CHID1-013 874722-883279 processed_transcript
  ENST00000528581 CHID1-002 869763-910810 protein_coding
  ENST00000529539 CHID1-024 868395-883249 protein_coding
  ENST00000530939 CHID1-009 902245-910821 protein_coding
  ENST00000531010 CHID1-016 882980-884151 retained_intron
  ENST00000531859 CHID1-015 883146-908659 protein_coding
  ENST00000532909 CHID1-021 868395-870486 nonsense_mediated_decay
  ENST00000533056 CHID1-005 902197-915058 protein_coding
  ENST00000533059 CHID1-006 902235-914820 protein_coding
  ENST00000534207 CHID1-023 868399-883178 nonsense_mediated_decay
  ENST00000534254 CHID1-018 884068-908664 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323578ENST00000429789ENST00000436108ENST00000454838ENST00000524832ENST00000526714ENST00000528426ENST00000528581ENST00000529539ENST00000530939ENST00000533059ENST00000534207
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323578 N/A 3.918±0.00 0.214±0.00 N/A N/A 2.371±0.00 N/A 4.192±0.00 N/A N/A N/A 5.382±0.00 N/A N/A
ENST00000429789 N/A 8.368±0.00 N/A 3.847±2.52 6.633±0.00 4.697±4.11 6.638±0.00 N/A 9.056±0.00 8.653±0.00 4.783±3.56 7.834±6.02 18.180±1.09 12.338±0.00
ENST00000436108 9.113±0.00 8.026±0.00 1.769±0.00 6.044±4.28 6.776±4.98 4.599±3.92 1.962±1.24 12.419±9.10 7.982±6.99 7.454±4.74 2.934±0.00 50.478±9.05 50.035±1.61 17.473±7.54
ENST00000454838 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A
ENST00000524832 7.104±0.00 N/A N/A N/A 2.244±0.00 N/A N/A N/A N/A N/A N/A 56.016±0.00 38.420±0.00 34.092±0.00
ENST00000526714 N/A N/A 0.697±0.00 3.627±2.08 14.118±0.00 N/A 5.070±0.00 3.690±0.00 15.780±0.00 9.303±0.00 2.283±0.00 N/A 12.712±0.00 17.138±0.00
ENST00000528426 N/A N/A 0.840±0.00 N/A 2.039±0.00 N/A 0.606±0.00 N/A N/A N/A N/A 10.009±8.51 N/A 17.981±0.00
ENST00000528581 9.004±0.00 11.499±0.00 N/A 4.783±0.00 10.728±0.00 4.405±0.00 N/A 8.696±0.00 N/A N/A 4.822±0.00 12.481±0.00 20.859±0.00 19.947±4.99
ENST00000529539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.060±0.00 N/A N/A N/A
ENST00000530939 N/A N/A N/A N/A N/A N/A N/A N/A 2.825±0.00 N/A 1.834±0.00 N/A N/A N/A
ENST00000533059 N/A N/A N/A N/A N/A N/A 0.538±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000534207 N/A N/A N/A N/A N/A 0.832±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ER CIL_0003ER_0001 CGP 11:842808-915058
CIL_0003EW CIL_0003EW_0001 CGP 11:867860-1012245

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 IEA chitinase activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005764 IDA lysosome
GO:0005770 IDA late endosome
GO:0005802 IDA trans-Golgi network
GO:0005975 IEA carbohydrate metabolic process
GO:0006032 IEA chitin catabolic process
GO:0016020 IDA membrane
GO:0045087 IEA innate immune response
GO:0070062 IDA extracellular vesicular exosome
GO:0070492 IPI oligosaccharide binding
GO:1900016 IDA negative regulation of cytokine production involved in inflammatory response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069673 chid1 chitinase domain containing 1 protein_coding Danio_rerio
ENSMUSG00000025512 Chid1 chitinase domain containing 1 protein_coding Mus_musculus

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