C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chitinase domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025512 Chid1 10090 - 7:141493136-141539857 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026586 Chid1-201 141493137-141539857 protein_coding
  ENSMUST00000064642 Chid1-005 141496048-141532934 nonsense_mediated_decay
  ENSMUST00000118694 Chid1-002 141493138-141539804 protein_coding
  ENSMUST00000133359 Chid1-003 141531907-141539832 retained_intron
  ENSMUST00000143561 Chid1-007 141515415-141539530 protein_coding
  ENSMUST00000147610 Chid1-004 141495397-141539819 retained_intron
  ENSMUST00000153191 Chid1-001 141493136-141539816 protein_coding
  ENSMUST00000155305 Chid1-006 141511775-141526467 processed_transcript
  ENSMUST00000166082 Chid1-202 141493137-141539857 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064642ENSMUST00000143561ENSMUST00000147610ENSMUST00000153191ENSMUST00000155305ENSMUST00000166082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.309±0.00
ENSMUST00000143561 N/A N/A N/A 30.194±0.00 N/A N/A N/A N/A N/A N/A 2.152±0.29 26.643±0.00 53.098±6.93 30.328±4.21
ENSMUST00000147610 N/A N/A N/A 1.692±0.44 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153191 7.414±2.42 14.584±0.00 6.236±0.84 4.735±1.39 7.989±1.02 6.766±1.69 4.288±0.35 8.705±0.96 5.829±2.49 6.548±1.30 1.260±0.25 8.484±4.79 10.691±2.68 4.517±3.31
ENSMUST00000155305 N/A N/A N/A N/A N/A 15.989±1.03 N/A N/A N/A N/A N/A N/A N/A 28.760±3.04
ENSMUST00000166082 5.328±0.62 10.079±0.00 N/A 2.307±0.00 N/A 4.407±1.44 N/A N/A 4.484±1.67 N/A 1.005±0.00 14.692±2.42 N/A 7.970±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EQ CIL_0003EQ_0002 CGP 7:141471860-141493427
CIL_0003ER CIL_0003ER_0002 CGP 7:141475240-141539857
CIL_0003EW CIL_0003EW_0002 CGP 7:141493136-141633011

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 IEA chitinase activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005764 IEA lysosome
GO:0005770 IEA late endosome
GO:0005802 IEA trans-Golgi network
GO:0005975 IEA carbohydrate metabolic process
GO:0006032 IEA chitin catabolic process
GO:0016020 IEA membrane
GO:0045087 IEA innate immune response
GO:0070062 IEA extracellular vesicular exosome
GO:0070492 IEA oligosaccharide binding
GO:1900016 IEA negative regulation of cytokine production involved in inflammatory response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069673 chid1 chitinase domain containing 1 protein_coding Danio_rerio
ENSG00000177830 CHID1 chitinase domain containing 1 protein_coding Homo_sapiens

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