C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ER_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000214063-ENSG00000177830 CGP 9606 11:842808-915058
GeneTranscriptPositionBiotype
ENSG00000177830 (CHID1)
chitinase domain containing 1 		ENST00000323578 (CHID1-001) 868396-911461 protein_coding
ENST00000429789 (CHID1-003) 869762-910835 protein_coding
ENST00000436108 (CHID1-004) 869767-910831 protein_coding
ENST00000449825 (CHID1-201) 867860-915058 protein_coding
ENST00000454838 (CHID1-202) 867860-904816 protein_coding
ENST00000524538 (CHID1-014) 869780-870751 retained_intron
ENST00000524832 (CHID1-012) 882328-902322 processed_transcript
ENST00000525225 (CHID1-011) 902971-910816 protein_coding
ENST00000525840 (CHID1-008) 904701-914801 protein_coding
ENST00000526714 (CHID1-020) 870419-904864 processed_transcript
ENST00000528154 (CHID1-007) 904737-914774 protein_coding
ENST00000528426 (CHID1-010) 899353-910791 nonsense_mediated_decay
ENST00000528521 (CHID1-017) 870122-884163 nonsense_mediated_decay
ENST00000528534 (CHID1-013) 874722-883279 processed_transcript
ENST00000528581 (CHID1-002) 869763-910810 protein_coding
ENST00000529539 (CHID1-024) 868395-883249 protein_coding
ENST00000530939 (CHID1-009) 902245-910821 protein_coding
ENST00000531010 (CHID1-016) 882980-884151 retained_intron
ENST00000531859 (CHID1-015) 883146-908659 protein_coding
ENST00000532909 (CHID1-021) 868395-870486 nonsense_mediated_decay
ENST00000533056 (CHID1-005) 902197-915058 protein_coding
ENST00000533059 (CHID1-006) 902235-914820 protein_coding
ENST00000534207 (CHID1-023) 868399-883178 nonsense_mediated_decay
ENST00000534254 (CHID1-018) 884068-908664 nonsense_mediated_decay
ENSG00000214063 (TSPAN4)
tetraspanin 4 		ENST00000346501 (TSPAN4-017) 847197-866776 protein_coding
ENST00000397396 (TSPAN4-201) 842824-867116 protein_coding
ENST00000397397 (TSPAN4-001) 842808-867111 protein_coding
ENST00000397404 (TSPAN4-202) 844446-867116 protein_coding
ENST00000397406 (TSPAN4-203) 844081-867116 protein_coding
ENST00000397408 (TSPAN4-204) 842941-867116 protein_coding
ENST00000397411 (TSPAN4-006) 842812-866817 protein_coding
ENST00000409531 (TSPAN4-005) 848810-867111 protein_coding
ENST00000409543 (TSPAN4-007) 844117-866857 protein_coding
ENST00000464987 (TSPAN4-002) 847197-867109 retained_intron
ENST00000468468 (TSPAN4-003) 862297-867109 retained_intron
ENST00000494815 (TSPAN4-004) 863272-867111 retained_intron
ENST00000524895 (TSPAN4-012) 847197-864653 retained_intron
ENST00000525201 (TSPAN4-015) 844153-866676 protein_coding
ENST00000525334 (TSPAN4-016) 843339-865753 protein_coding
ENST00000526055 (TSPAN4-013) 847197-862834 retained_intron
ENST00000527644 (TSPAN4-010) 849816-865740 protein_coding
ENST00000529566 (TSPAN4-014) 862345-865825 retained_intron
ENST00000530404 (TSPAN4-011) 843315-862741 protein_coding
ENST00000532375 (TSPAN4-018) 847197-865942 protein_coding
ENSG00000250397 (RP11-1391J7.1)
 ENST00000506172 (RP11-1391J7.1-001) 856880-859795 antisense
CIL_0003ER_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025511-ENSMUSG00000025512 CGP 10090 7:141475240-141539857
GeneTranscriptPositionBiotype
ENSMUSG00000025511 (Tspan4)
tetraspanin 4 		ENSMUST00000026585 (Tspan4-001) 141475240-141493427 protein_coding
ENSMUST00000117634 (Tspan4-002) 141476400-141493421 protein_coding
ENSMUST00000130402 (Tspan4-006) 141491489-141492960 retained_intron
ENSMUST00000138092 (Tspan4-003) 141475510-141491803 protein_coding
ENSMUST00000140858 (Tspan4-005) 141475736-141489620 protein_coding
ENSMUST00000146305 (Tspan4-004) 141475513-141491816 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ER_0001ENSG00000177830ENST00000323578ENST00000429789ENST00000436108ENST00000449825ENST00000454838ENST00000524538ENST00000524832ENST00000525225ENST00000525840ENST00000526714ENST00000528154ENST00000528426ENST00000528521ENST00000528534ENST00000528581ENST00000529539ENST00000530939ENST00000531010ENST00000531859ENST00000532909ENST00000533056ENST00000533059ENST00000534207ENST00000534254ENSG00000214063ENST00000346501ENST00000397396ENST00000397397ENST00000397404ENST00000397406ENST00000397408ENST00000397411ENST00000409531ENST00000409543ENST00000464987ENST00000468468ENST00000494815ENST00000524895ENST00000525201ENST00000525334ENST00000526055ENST00000527644ENST00000529566ENST00000530404ENST00000532375ENSG00000250397ENST00000506172CIL_0003ER_0002ENSMUSG00000025511ENSMUST00000026585ENSMUST00000117634ENSMUST00000130402ENSMUST00000138092ENSMUST00000140858ENSMUST00000146305
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ER_0001ENSG00000177830ENST00000323578ENST00000429789ENST00000436108ENST00000454838ENST00000524832ENST00000526714ENST00000528426ENST00000528581ENST00000529539ENST00000530939ENST00000533059ENST00000534207ENSG00000214063ENST00000346501ENST00000397396ENST00000397397ENST00000397404ENST00000397406ENST00000397408ENST00000397411ENST00000409531ENST00000409543ENST00000464987ENST00000468468ENST00000494815ENST00000524895ENST00000525201ENST00000525334ENST00000526055ENST00000527644ENST00000529566ENST00000532375ENSG00000250397ENST00000506172CIL_0003ER_0002ENSMUSG00000025511ENSMUST00000026585ENSMUST00000117634ENSMUST00000138092
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177830 ENST00000323578 N/A 3.918±0.00 0.214±0.00 N/A N/A 2.371±0.00 N/A 4.192±0.00 N/A N/A N/A 5.382±0.00 N/A N/A
ENST00000429789 N/A 8.368±0.00 N/A 3.847±2.52 6.633±0.00 4.697±4.11 6.638±0.00 N/A 9.056±0.00 8.653±0.00 4.783±3.56 7.834±6.02 18.180±1.09 12.338±0.00
ENST00000436108 9.113±0.00 8.026±0.00 1.769±0.00 6.044±4.28 6.776±4.98 4.599±3.92 1.962±1.24 12.419±9.10 7.982±6.99 7.454±4.74 2.934±0.00 50.478±9.05 50.035±1.61 17.473±7.54
ENST00000449825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454838 N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A N/A N/A
ENST00000524538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524832 7.104±0.00 N/A N/A N/A 2.244±0.00 N/A N/A N/A N/A N/A N/A 56.016±0.00 38.420±0.00 34.092±0.00
ENST00000525225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526714 N/A N/A 0.697±0.00 3.627±2.08 14.118±0.00 N/A 5.070±0.00 3.690±0.00 15.780±0.00 9.303±0.00 2.283±0.00 N/A 12.712±0.00 17.138±0.00
ENST00000528154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528426 N/A N/A 0.840±0.00 N/A 2.039±0.00 N/A 0.606±0.00 N/A N/A N/A N/A 10.009±8.51 N/A 17.981±0.00
ENST00000528521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528581 9.004±0.00 11.499±0.00 N/A 4.783±0.00 10.728±0.00 4.405±0.00 N/A 8.696±0.00 N/A N/A 4.822±0.00 12.481±0.00 20.859±0.00 19.947±4.99
ENST00000529539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.060±0.00 N/A N/A N/A
ENST00000530939 N/A N/A N/A N/A N/A N/A N/A N/A 2.825±0.00 N/A 1.834±0.00 N/A N/A N/A
ENST00000531010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533059 N/A N/A N/A N/A N/A N/A 0.538±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000534207 N/A N/A N/A N/A N/A 0.832±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214063 ENST00000346501 22.066±0.00 N/A N/A N/A N/A 1.555±0.00 0.416±0.00 N/A N/A N/A N/A 18.269±15.79 26.531±7.58 4.824±0.00
ENST00000397396 N/A N/A N/A N/A 0.553±0.00 N/A N/A 0.434±0.00 N/A N/A N/A N/A N/A N/A
ENST00000397397 23.177±0.00 35.934±0.00 N/A 1.432±0.00 20.176±0.00 11.199±10.86 10.219±0.00 24.354±0.00 6.554±0.00 15.042±13.45 N/A 37.337±0.00 42.071±2.34 31.057±0.00
ENST00000397404 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.015±6.16 N/A 18.247±0.00 N/A N/A
ENST00000397406 N/A N/A N/A N/A 8.530±0.00 N/A N/A N/A N/A N/A 2.084±0.00 7.638±6.43 14.136±0.00 N/A
ENST00000397408 N/A N/A N/A N/A 9.138±0.00 N/A 5.555±0.00 N/A 2.091±0.00 N/A N/A 19.320±0.00 17.939±0.00 N/A
ENST00000397411 21.751±0.00 29.772±0.00 N/A N/A 18.629±0.00 15.179±0.00 N/A 9.961±0.00 4.577±0.00 19.620±0.00 1.638±0.00 27.223±5.04 27.960±2.41 N/A
ENST00000409531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.349±0.73 N/A N/A N/A
ENST00000409543 N/A N/A N/A N/A 0.571±0.00 N/A 0.407±0.00 N/A 1.056±0.00 N/A N/A N/A N/A N/A
ENST00000464987 N/A N/A N/A N/A N/A N/A 0.212±0.00 N/A N/A 0.392±0.00 N/A N/A N/A N/A
ENST00000468468 N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A N/A N/A N/A 0.364±0.26 N/A N/A
ENST00000494815 N/A N/A 0.165±0.00 0.338±0.00 N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A 1.211±0.00
ENST00000524895 N/A N/A 1.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525201 N/A N/A 0.952±0.00 0.392±0.00 0.782±0.00 N/A N/A 0.912±0.00 N/A 1.807±0.00 N/A N/A 24.929±0.00 N/A
ENST00000525334 N/A N/A N/A N/A 1.610±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526055 N/A N/A N/A 1.344±0.70 N/A N/A N/A 3.169±0.00 3.734±0.00 N/A N/A N/A N/A N/A
ENST00000527644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.973±0.00 N/A 4.758±0.00
ENST00000529566 N/A N/A 0.842±0.00 0.630±0.00 N/A N/A 1.692±0.00 N/A 2.202±0.00 1.757±0.00 N/A 1.122±0.00 N/A N/A
ENST00000530404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532375 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.764±0.00 N/A
ENSG00000250397 ENST00000506172 0.987±0.00 1.497±0.00 0.020±0.00 0.402±0.30 0.357±0.20 0.575±0.41 0.221±0.21 0.869±0.44 0.126±0.01 0.568±0.38 0.060±0.02 0.185±0.15 0.118±0.06 0.763±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025511 ENSMUST00000026585 33.124±3.78 71.574±6.17 26.200±0.00 5.138±0.50 38.640±6.90 7.180±0.86 8.638±2.03 24.359±4.67 22.760±3.99 24.598±11.80 1.979±0.11 114.336±42.70 26.356±0.01 N/A
ENSMUST00000117634 35.927±13.47 48.776±12.06 33.035±2.82 9.282±2.94 28.280±11.15 10.258±1.27 16.826±3.77 31.385±6.12 14.804±2.08 30.798±11.01 4.507±1.48 46.530±18.74 N/A N/A
ENSMUST00000130402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138092 N/A 79.802±17.22 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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