C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chitinase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528426 CHID1-010 ENSG00000177830 9606 - 11:899353-910791 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartOvaryTestisENST00000528426
Transcript ID Bladder Breast Heart Ovary Testis
ENST00000528426 0.840±0.00 2.039±0.00 0.606±0.00 10.009±8.51 17.981±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ER CIL_0003ER_0001 CGP 11:842808-915058
CIL_0003EW CIL_0003EW_0001 CGP 11:867860-1012245

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026586 Chid1-201 protein_coding Mus_musculus 0 590
ENSMUST00000166082 Chid1-202 protein_coding Mus_musculus 0 590
ENSMUST00000143561 Chid1-007 protein_coding Mus_musculus 0 590
ENSMUST00000064642 Chid1-005 nonsense_mediated_decay Mus_musculus 0 590
ENSMUST00000118694 Chid1-002 protein_coding Mus_musculus 0 590
ENSMUST00000153191 Chid1-001 protein_coding Mus_musculus 0 590
ENSMUST00000147610 Chid1-004 retained_intron Mus_musculus 0 536
ENSMUST00000133359 Chid1-003 retained_intron Mus_musculus 8e-34 148
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0.0000001 62
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0.00002 55

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