C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-sulfoglucosamine sulfohydrolase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000181523 SGSH 9606 - 17:80206716-80220923 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326317 SGSH-001 80209264-80220400 protein_coding
  ENST00000570427 SGSH-017 80214290-80220333 protein_coding
  ENST00000570923 SGSH-004 80211534-80220338 protein_coding
  ENST00000571051 SGSH-009 80214166-80220333 retained_intron
  ENST00000571075 SGSH-006 80216723-80220333 retained_intron
  ENST00000571156 SGSH-014 80207605-80209874 processed_transcript
  ENST00000571675 SGSH-008 80214570-80220333 retained_intron
  ENST00000572208 SGSH-011 80213832-80220331 processed_transcript
  ENST00000572257 SGSH-015 80207656-80214722 protein_coding
  ENST00000573150 SGSH-003 80209290-80220360 nonsense_mediated_decay
  ENST00000574505 SGSH-016 80213821-80220258 nonsense_mediated_decay
  ENST00000575188 SGSH-007 80214855-80220333 retained_intron
  ENST00000575282 SGSH-002 80209282-80220322 retained_intron
  ENST00000575484 SGSH-013 80206716-80209542 processed_transcript
  ENST00000576707 SGSH-005 80214243-80220923 protein_coding
  ENST00000576856 SGSH-012 80210397-80212218 protein_coding
  ENST00000576941 SGSH-010 80212205-80220333 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326317ENST00000570923ENST00000571075ENST00000571156ENST00000571675ENST00000573150ENST00000575282ENST00000575484ENST00000576856
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326317 4.568±0.00 7.674±0.00 0.335±0.00 N/A N/A N/A N/A N/A N/A N/A 16.534±0.00 9.179±0.00 N/A
ENST00000570923 N/A N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A
ENST00000571075 N/A N/A N/A N/A N/A N/A 3.228±0.00 N/A N/A N/A N/A N/A N/A
ENST00000571156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.596±0.00 N/A N/A
ENST00000571675 N/A N/A N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A
ENST00000573150 11.372±0.00 7.222±0.00 N/A 13.206±0.00 9.326±0.00 5.684±0.00 6.527±0.00 3.036±0.00 12.786±0.00 2.472±0.00 4.510±3.04 11.889±4.71 6.153±2.68
ENST00000575282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A 1.167±0.00
ENST00000575484 N/A N/A N/A N/A 1.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576856 N/A N/A 1.156±0.00 N/A N/A N/A N/A N/A N/A N/A 0.931±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031S CIL_00031S_0001 CGP 17:80135214-80209331
CIL_00042E CIL_00042E_0001 CGP 17:80169992-80220923
CIL_00042F CIL_00042F_0001 CGP 17:80206716-80253500

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 TAS:IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005975 TAS carbohydrate metabolic process
GO:0006027 TAS glycosaminoglycan catabolic process
GO:0006029 TAS proteoglycan metabolic process
GO:0008152 IEA metabolic process
GO:0008484 IEA sulfuric ester hydrolase activity
GO:0016250 IEA N-sulfoglucosamine sulfohydrolase activity
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0043202 TAS lysosomal lumen
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032087 sgsh N-sulfoglucosamine sulfohydrolase (sulfamidase) protein_coding Danio_rerio
ENSMUSG00000005043 Sgsh N-sulfoglucosamine sulfohydrolase (sulfamidase) protein_coding Mus_musculus

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