C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: N-sulfoglucosamine sulfohydrolase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000575282 SGSH-002 ENSG00000181523 9606 - 17:80209282-80220322 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000575282
Transcript ID Ovary Testis
ENST00000575282 0.097±0.00 1.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031S CIL_00031S_0001 CGP 17:80135214-80209331
CIL_00042E CIL_00042E_0001 CGP 17:80169992-80220923
CIL_00042F CIL_00042F_0001 CGP 17:80206716-80253500

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100172 Sgsh-006 protein_coding Mus_musculus 0 660
ENSMUST00000005173 Sgsh-001 protein_coding Mus_musculus 0 660
ENSMUST00000133507 Sgsh-002 processed_transcript Mus_musculus 0 592
ENSMUST00000136523 Sgsh-003 nonsense_mediated_decay Mus_musculus 0 592
ENSMUST00000126132 Sgsh-005 processed_transcript Mus_musculus 0 414
ENSMUST00000141540 Sgsh-004 processed_transcript Mus_musculus 0 215

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