C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00031S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141543-ENSG00000141527 CGP 9606 17:80135214-80209331
GeneTranscriptPositionBiotype
ENSG00000141543 (EIF4A3)
eukaryotic translation initiation factor 4A3 		ENST00000269349 (EIF4A3-001) 80135214-80147183 protein_coding
ENST00000570625 (EIF4A3-010) 80135264-80136322 retained_intron
ENST00000570837 (EIF4A3-006) 80139686-80140476 retained_intron
ENST00000575668 (EIF4A3-008) 80136803-80138273 retained_intron
ENST00000575957 (EIF4A3-004) 80141695-80147139 retained_intron
ENST00000575978 (EIF4A3-002) 80135255-80139487 retained_intron
ENST00000576547 (EIF4A3-005) 80140075-80147139 protein_coding
ENST00000576573 (EIF4A3-009) 80135264-80137603 retained_intron
ENSG00000181523 (SGSH)
N-sulfoglucosamine sulfohydrolase 		ENST00000326317 (SGSH-001) 80209264-80220400 protein_coding
ENST00000570427 (SGSH-017) 80214290-80220333 protein_coding
ENST00000570923 (SGSH-004) 80211534-80220338 protein_coding
ENST00000571051 (SGSH-009) 80214166-80220333 retained_intron
ENST00000571075 (SGSH-006) 80216723-80220333 retained_intron
ENST00000571156 (SGSH-014) 80207605-80209874 processed_transcript
ENST00000571675 (SGSH-008) 80214570-80220333 retained_intron
ENST00000572208 (SGSH-011) 80213832-80220331 processed_transcript
ENST00000572257 (SGSH-015) 80207656-80214722 protein_coding
ENST00000573150 (SGSH-003) 80209290-80220360 nonsense_mediated_decay
ENST00000574505 (SGSH-016) 80213821-80220258 nonsense_mediated_decay
ENST00000575188 (SGSH-007) 80214855-80220333 retained_intron
ENST00000575282 (SGSH-002) 80209282-80220322 retained_intron
ENST00000575484 (SGSH-013) 80206716-80209542 processed_transcript
ENST00000576707 (SGSH-005) 80214243-80220923 protein_coding
ENST00000576856 (SGSH-012) 80210397-80212218 protein_coding
ENST00000576941 (SGSH-010) 80212205-80220333 nonsense_mediated_decay
ENSG00000262580 (RP11-334C17.5)
 ENST00000570309 (RP11-334C17.5-005) 80200673-80205071 antisense
ENST00000572730 (RP11-334C17.5-002) 80203833-80205949 antisense
ENST00000573346 (RP11-334C17.5-001) 80201589-80205476 antisense
ENST00000573935 (RP11-334C17.5-004) 80201746-80204335 antisense
ENST00000576824 (RP11-334C17.5-003) 80201708-80205627 antisense
ENSG00000275479 (RP11-334C17.6)
 ENST00000619415 (RP11-334C17.6-001) 80149627-80149798 lincRNA
ENSG00000279259 (RP11-334C17.3)
 ENST00000624270 (RP11-334C17.3-001) 80147250-80148596 TEC
CIL_00031S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025580-ENSMUSG00000013483 CGP 10090 11:119288363-119345375
GeneTranscriptPositionBiotype
ENSMUSG00000005043 (Sgsh)
N-sulfoglucosamine sulfohydrolase (sulfamidase) 		ENSMUST00000005173 (Sgsh-001) 119343482-119355536 protein_coding
ENSMUST00000100172 (Sgsh-006) 119343498-119355510 protein_coding
ENSMUST00000126132 (Sgsh-005) 119346418-119347861 processed_transcript
ENSMUST00000133507 (Sgsh-002) 119346242-119355530 processed_transcript
ENSMUST00000136523 (Sgsh-003) 119343425-119355502 nonsense_mediated_decay
ENSMUST00000141540 (Sgsh-004) 119346799-119352699 processed_transcript
ENSMUSG00000013483 (Card14)
caspase recruitment domain family, member 14 		ENSMUST00000053245 (Card14-201) 119314787-119345375 protein_coding
ENSMUST00000106250 (Card14-001) 119307768-119345375 protein_coding
ENSMUST00000147167 (Card14-002) 119321853-119345187 processed_transcript
ENSMUST00000151052 (Card14-003) 119324147-119345374 processed_transcript
ENSMUSG00000025580 (Eif4a3)
eukaryotic translation initiation factor 4A3 		ENSMUST00000026667 (Eif4a3-001) 119288363-119300089 protein_coding
ENSMUST00000106253 (Eif4a3-003) 119292841-119300014 protein_coding
ENSMUST00000129044 (Eif4a3-005) 119288364-119289010 processed_transcript
ENSMUST00000134743 (Eif4a3-002) 119297692-119300018 processed_transcript
ENSMUST00000135294 (Eif4a3-004) 119292500-119293596 processed_transcript
ENSMUST00000138849 (Eif4a3-006) 119288364-119289076 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00031S_0001ENSG00000141543ENST00000269349ENST00000575957ENST00000575978ENST00000576547ENST00000576573ENSG00000181523ENST00000326317ENST00000570923ENST00000571075ENST00000571156ENST00000571675ENST00000573150ENST00000575282ENST00000575484ENST00000576856ENSG00000262580ENST00000570309ENSG00000275479ENST00000619415ENSG00000279259ENST00000624270CIL_00031S_0002ENSMUSG00000005043ENSMUST00000005173ENSMUST00000100172ENSMUST00000133507ENSMUST00000136523ENSMUSG00000013483ENSMUST00000053245ENSMUST00000106250ENSMUST00000147167ENSMUST00000151052ENSMUSG00000025580ENSMUST00000026667ENSMUST00000106253ENSMUST00000129044ENSMUST00000134743
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141543 ENST00000269349 23.670±0.00 33.202±0.00 1.989±0.00 11.515±4.85 9.937±5.71 15.525±9.25 6.594±4.84 22.900±16.82 7.665±4.98 18.114±14.12 6.769±4.80 29.623±15.93 43.615±5.74 38.237±9.31
ENST00000570625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575957 N/A N/A 1.589±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.124±2.05 N/A N/A
ENST00000576547 N/A N/A N/A N/A N/A N/A 1.298±0.00 N/A N/A N/A N/A 34.443±0.00 40.032±0.00 44.431±0.00
ENST00000576573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.701±0.00 N/A N/A
ENSG00000181523 ENST00000326317 4.568±0.00 7.674±0.00 0.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 16.534±0.00 9.179±0.00 N/A
ENST00000570427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570923 N/A N/A N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A N/A N/A N/A
ENST00000571051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571075 N/A N/A N/A N/A N/A N/A N/A 3.228±0.00 N/A N/A N/A N/A N/A N/A
ENST00000571156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.596±0.00 N/A N/A
ENST00000571675 N/A N/A N/A N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A
ENST00000572208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573150 11.372±0.00 7.222±0.00 N/A N/A 13.206±0.00 9.326±0.00 5.684±0.00 6.527±0.00 3.036±0.00 12.786±0.00 2.472±0.00 4.510±3.04 11.889±4.71 6.153±2.68
ENST00000574505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A 1.167±0.00
ENST00000575484 N/A N/A N/A N/A N/A 1.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576856 N/A N/A 1.156±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.931±0.00 N/A N/A
ENST00000576941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000262580 ENST00000570309 N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A N/A 0.294±0.00 N/A 0.788±0.70 N/A 1.110±0.00
ENST00000572730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000275479 ENST00000619415 0.081±0.00 0.408±0.00 N/A 0.487±0.00 0.315±0.00 0.590±0.00 N/A 0.781±0.00 N/A N/A N/A 0.782±0.00 0.578±0.06 0.857±0.31
ENSG00000279259 ENST00000624270 0.201±0.00 0.347±0.00 0.258±0.00 0.382±0.06 0.442±0.00 0.225±0.00 0.093±0.00 0.587±0.00 0.052±0.00 0.261±0.00 N/A 0.509±0.09 0.189±0.06 0.948±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005043 ENSMUST00000005173 7.696±0.67 14.815±0.87 4.922±1.71 0.640±0.14 8.169±2.96 9.466±0.94 1.955±0.48 5.476±1.53 1.609±0.65 11.402±0.04 0.962±0.36 7.231±3.03 4.348±1.55 3.366±0.21
ENSMUST00000100172 N/A N/A N/A 0.779±0.00 1.088±0.00 N/A 0.418±0.00 N/A 0.314±0.13 N/A 0.464±0.00 1.314±0.43 2.236±0.54 0.462±0.00
ENSMUST00000126132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133507 6.658±1.26 13.241±1.99 N/A 0.829±0.16 12.049±2.58 6.898±0.87 1.765±0.23 5.387±1.45 1.732±0.49 12.647±2.04 N/A 10.358±2.30 N/A 2.363±0.36
ENSMUST00000136523 N/A N/A N/A 0.494±0.00 N/A N/A N/A N/A N/A N/A N/A 1.849±0.58 0.599±0.00 N/A
ENSMUST00000141540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000013483 ENSMUST00000053245 N/A N/A N/A N/A N/A 5.386±1.27 N/A 1.379±0.00 0.219±0.04 N/A N/A N/A N/A N/A
ENSMUST00000106250 N/A N/A 1.606±0.12 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.064±0.00 N/A
ENSMUST00000151052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.252±0.00 N/A N/A N/A
ENSMUSG00000025580 ENSMUST00000026667 41.758±9.69 23.501±1.36 38.403±3.35 41.792±18.72 29.042±7.61 33.016±9.46 23.433±6.30 39.926±2.41 42.111±23.66 37.655±5.08 13.697±1.13 46.253±11.83 55.033±24.72 25.945±11.20
ENSMUST00000106253 N/A N/A N/A 16.282±0.00 N/A N/A N/A N/A N/A N/A N/A 29.111±0.00 34.724±13.87 11.035±0.00
ENSMUST00000129044 N/A N/A N/A 30.334±0.00 26.104±0.00 N/A N/A N/A N/A N/A N/A 40.135±10.83 64.937±30.54 18.513±0.00
ENSMUST00000134743 N/A 20.652±2.98 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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