C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-sulfoglucosamine sulfohydrolase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573150 SGSH-003 ENSG00000181523 9606 - 17:80209290-80220360 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000573150
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000573150 11.372±0.00 7.222±0.00 13.206±0.00 9.326±0.00 5.684±0.00 6.527±0.00 3.036±0.00 12.786±0.00 2.472±0.00 4.510±3.04 11.889±4.71 6.153±2.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031S CIL_00031S_0001 CGP 17:80135214-80209331
CIL_00042E CIL_00042E_0001 CGP 17:80169992-80220923
CIL_00042F CIL_00042F_0001 CGP 17:80206716-80253500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0008152 IEA metabolic process
GO:0008484 IEA sulfuric ester hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133507 Sgsh-002 processed_transcript Mus_musculus 0 1406
ENSMUST00000005173 Sgsh-001 protein_coding Mus_musculus 0 1214
ENSMUST00000100172 Sgsh-006 protein_coding Mus_musculus 0 712
ENSMUST00000136523 Sgsh-003 nonsense_mediated_decay Mus_musculus 0 693
ENSMUST00000126132 Sgsh-005 processed_transcript Mus_musculus 0 414
ENSMUST00000141540 Sgsh-004 processed_transcript Mus_musculus 0 254

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