C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 17 open reading frame 70
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000185504 C17orf70 9606 - 17:81539885-81553961 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327787 C17orf70-001 81539885-81552377 protein_coding
  ENST00000425898 C17orf70-004 81539886-81548498 protein_coding
  ENST00000443656 C17orf70-002 81539885-81552376 nonsense_mediated_decay
  ENST00000536161 C17orf70-006 81550797-81553961 protein_coding
  ENST00000541246 C17orf70-008 81549254-81553109 protein_coding
  ENST00000544302 C17orf70-007 81550292-81553127 protein_coding
  ENST00000545865 C17orf70-005 81544004-81547203 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000327787ENST00000425898ENST00000443656ENST00000541246ENST00000545865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000327787 2.024±0.00 N/A 0.277±0.00 0.709±0.28 0.660±0.52 2.057±0.00 2.203±0.00 4.698±0.00 1.952±1.80 0.711±0.30 4.567±0.00 5.249±1.97 2.900±0.96 1.840±0.41
ENST00000425898 1.831±0.00 7.199±0.00 N/A 1.266±0.00 1.403±1.03 0.890±0.45 N/A 1.377±0.00 0.441±0.23 2.383±0.00 N/A 3.138±1.50 1.689±0.19 2.176±0.12
ENST00000443656 2.174±0.00 3.232±0.00 0.332±0.00 0.713±0.00 1.177±1.01 0.640±0.00 1.212±0.00 0.970±0.00 N/A N/A N/A 2.209±0.95 0.709±0.00 N/A
ENST00000541246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A N/A N/A
ENST00000545865 N/A N/A N/A N/A N/A N/A N/A 0.584±0.00 N/A N/A 0.413±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BP CIL_0003BP_0001 CGP 17:81528396-81553961
CIL_0003BK CIL_0003BK_0001 CGP 17:81539885-81648465

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006281 TAS DNA repair
GO:0043240 IEA Fanconi anaemia nuclear complex
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079457 C12H17orf70 chromosome 17 open reading frame 70 protein_coding Danio_rerio
ENSMUSG00000025384 2310003H01Rik RIKEN cDNA 2310003H01 gene protein_coding Mus_musculus

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