C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 17 open reading frame 70
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425898 C17orf70-004 ENSG00000185504 9606 - 17:81539886-81548498 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000425898
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000425898 1.831±0.00 7.199±0.00 1.266±0.00 1.403±1.03 0.890±0.45 1.377±0.00 0.441±0.23 2.383±0.00 3.138±1.50 1.689±0.19 2.176±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BP CIL_0003BP_0001 CGP 17:81528396-81553961
CIL_0003BK CIL_0003BK_0001 CGP 17:81539885-81648465

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006281 IEA DNA repair
GO:0043240 IEA Fanconi anaemia nuclear complex
GO:0045111 IDA intermediate filament cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026448 2310003H01Rik-001 protein_coding Mus_musculus 0 817
ENSMUST00000135635 2310003H01Rik-006 retained_intron Mus_musculus 0 817
ENSMUST00000154826 2310003H01Rik-003 retained_intron Mus_musculus 0 475

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